Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RPL7L1P4-201ENST00000513004 707 ntBASIC6.28□□□□□ -1.4
NXF3Q9H4D5 RNA5SP116-201ENST00000516132 98 ntBASIC6.28□□□□□ -1.4
NXF3Q9H4D5 SCARNA21.2-201ENST00000516600 166 ntBASIC6.28□□□□□ -1.4
NXF3Q9H4D5 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.28□□□□□ -1.4
NXF3Q9H4D5 AC018558.5-201ENST00000565840 952 ntBASIC6.28□□□□□ -1.4
NXF3Q9H4D5 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.28□□□□□ -1.4
NXF3Q9H4D5 FO393422.1-201ENST00000603908 708 ntBASIC6.28□□□□□ -1.4
NXF3Q9H4D5 AL512624.1-201ENST00000613638 469 ntBASIC6.28□□□□□ -1.4
NXF3Q9H4D5 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NXF3Q9H4D5 AC027279.1-201ENST00000568885 4284 ntBASIC6.28□□□□□ -1.4
NXF3Q9H4D5 AC114876.1-201ENST00000490962 1366 ntBASIC6.28□□□□□ -1.4
NXF3Q9H4D5 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
NXF3Q9H4D5 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
NXF3Q9H4D5 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NXF3Q9H4D5 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NXF3Q9H4D5 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
NXF3Q9H4D5 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.4
NXF3Q9H4D5 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 AP004607.3-201ENST00000530354 3915 ntBASIC6.27□□□□□ -1.41
NXF3Q9H4D5 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.27□□□□□ -1.41
NXF3Q9H4D5 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 SNORA81.2-201ENST00000516868 170 ntBASIC6.27□□□□□ -1.41
NXF3Q9H4D5 AC021678.3-201ENST00000517893 476 ntBASIC6.27□□□□□ -1.41
NXF3Q9H4D5 AC090424.1-201ENST00000535243 736 ntBASIC6.27□□□□□ -1.41
NXF3Q9H4D5 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 AL589674.2-201ENST00000604304 337 ntBASIC6.27□□□□□ -1.41
NXF3Q9H4D5 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 AC022467.1-201ENST00000614738 749 ntBASIC6.27□□□□□ -1.41
NXF3Q9H4D5 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 AC022164.1-201ENST00000568767 2673 ntBASIC6.27□□□□□ -1.41
NXF3Q9H4D5 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NXF3Q9H4D5 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 ZNF969P-201ENST00000510345 2341 ntBASIC6.26□□□□□ -1.41
NXF3Q9H4D5 AL161756.3-201ENST00000641216 2071 ntBASIC6.26□□□□□ -1.41
NXF3Q9H4D5 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 RPL6P21-201ENST00000418672 846 ntBASIC6.26□□□□□ -1.41
NXF3Q9H4D5 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 AC019205.1-201ENST00000421830 730 ntBASIC6.26□□□□□ -1.41
NXF3Q9H4D5 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 FMO7P-201ENST00000436045 768 ntBASIC6.26□□□□□ -1.41
NXF3Q9H4D5 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 RPS26P39-201ENST00000469206 341 ntBASIC6.26□□□□□ -1.41
NXF3Q9H4D5 AL355032.1-201ENST00000472981 438 ntBASIC6.26□□□□□ -1.41
NXF3Q9H4D5 RN7SL466P-201ENST00000497546 295 ntBASIC6.26□□□□□ -1.41
NXF3Q9H4D5 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.26□□□□□ -1.41
NXF3Q9H4D5 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 AC096996.1-201ENST00000563813 325 ntBASIC6.26□□□□□ -1.41
NXF3Q9H4D5 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 AC007346.2-201ENST00000564816 892 ntBASIC6.26□□□□□ -1.41
NXF3Q9H4D5 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 CU639417.4-201ENST00000623928 207 ntBASIC6.26□□□□□ -1.41
NXF3Q9H4D5 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.26□□□□□ -1.41
NXF3Q9H4D5 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 RMRPP5-201ENST00000411156 267 ntBASIC6.25□□□□□ -1.41
NXF3Q9H4D5 OR6E1P-201ENST00000414424 923 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms