Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
BHLHE41Q9C0J9 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
BHLHE41Q9C0J9 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
BHLHE41Q9C0J9 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
BHLHE41Q9C0J9 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
BHLHE41Q9C0J9 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
BHLHE41Q9C0J9 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC090643.1-201ENST00000623600 3100 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 DDX18P6-201ENST00000450119 1997 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 SSX6-201ENST00000376932 562 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 CST13P-201ENST00000376992 428 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 NCSTNP1-201ENST00000406229 144 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC244452.1-201ENST00000413798 141 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 RPL21P108-201ENST00000413857 481 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC019050.1-201ENST00000418508 492 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 RNGTTP1-201ENST00000420965 728 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 COX6CP12-201ENST00000446748 202 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AL591363.1-201ENST00000450091 483 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC003071.1-201ENST00000451219 789 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 RPL23AP35-201ENST00000451906 501 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 OR6C5P-201ENST00000452388 923 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 RPL5P24-201ENST00000463742 885 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC117395.1-201ENST00000487390 403 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC114781.4-201ENST00000513707 639 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 IGKV2-29-201ENST00000521304 372 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 OR7E96P-201ENST00000530816 976 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 OR6C7P-201ENST00000547875 934 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 DPPA2P4-201ENST00000563717 878 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 DNM1P31-201ENST00000564149 696 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC006557.4-201ENST00000585516 830 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC004890.3-201ENST00000605566 1095 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC023158.2-201ENST00000614876 543 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 AC005614.1-201ENST00000598952 3653 ntBASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
BHLHE41Q9C0J9 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.28
BHLHE41Q9C0J9 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
BHLHE41Q9C0J9 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
BHLHE41Q9C0J9 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
BHLHE41Q9C0J9 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.02□□□□□ -1.28
BHLHE41Q9C0J9 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.02□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms