Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ABCA11P-202ENST00000504019 2110 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC026310.1-201ENST00000396004 378 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AL353133.1-201ENST00000407695 401 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 U3.43-201ENST00000410734 213 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 BX664727.1-201ENST00000416024 466 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AL929472.1-201ENST00000417484 429 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 CYP4F30P-202ENST00000420048 405 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 RPL23AP85-201ENST00000421838 433 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 PTP4A1P7-201ENST00000423476 514 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC000089.1-201ENST00000424559 801 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AP003385.1-201ENST00000426387 893 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC003989.1-201ENST00000434569 565 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 GAPDHP33-201ENST00000443168 1013 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 DNAJC19P5-201ENST00000443295 316 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 Z77249.1-201ENST00000444622 1175 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 EXOSC3P1-201ENST00000448649 500 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 BUD31P2-201ENST00000449374 300 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC008379.1-201ENST00000463655 464 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC098818.1-201ENST00000478593 252 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC114728.1-201ENST00000488289 483 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 RPL5P14-201ENST00000494197 878 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC114324.2-202ENST00000503812 134 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC010627.1-201ENST00000503819 1294 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC122718.2-201ENST00000505325 591 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 SNORA81.2-201ENST00000516868 170 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 DUXAP5-201ENST00000529668 529 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC023538.1-201ENST00000534576 736 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC025918.2-201ENST00000558683 763 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 VN1R87P-201ENST00000596706 487 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC245052.7-201ENST00000601161 359 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 MIR6885-201ENST00000612241 66 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC078880.5-201ENST00000617845 421 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AL512427.1-201ENST00000618593 349 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 MIR6861-201ENST00000618657 64 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC211486.4-201ENST00000621495 113 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AL035425.4-201ENST00000624509 1063 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AL022323.4-201ENST00000623980 13120 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 AC090181.3-201ENST00000624777 1514 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms