Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RPL23AP17-201ENST00000401064 499 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 OR2AT2P-201ENST00000413438 905 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 NPM1P22-201ENST00000427761 952 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 RN7SL352P-201ENST00000466002 277 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 RN7SL269P-201ENST00000467795 305 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 OR5M14P-201ENST00000506803 618 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 IGLV3-30-201ENST00000524362 298 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 AP000864.1-201ENST00000609424 650 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 CR383656.5-201ENST00000547616 1340 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AC126120.1-201ENST00000431082 470 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 RN7SKP248-201ENST00000516278 305 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 OR10G5P-201ENST00000532733 358 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AP001357.1-201ENST00000586304 1053 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 THAP12P9-201ENST00000503971 2360 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AL139805.2-201ENST00000455305 2433 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 HSPD1P9-201ENST00000420325 1636 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AL121977.1-201ENST00000401636 979 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 SPTLC1P2-201ENST00000407089 121 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 SDHDP6-201ENST00000414693 480 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AC002504.1-201ENST00000438281 691 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 BX679664.2-201ENST00000439282 283 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AC021146.10-201ENST00000515628 706 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 IGLV2-28-201ENST00000520681 304 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 TPM3P3-201ENST00000521343 354 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 DPPA2P4-201ENST00000563717 878 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AC116651.1-201ENST00000609724 556 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 MAPK10-350ENST00000641777 965 ntBASIC5.97□□□□□ -1.45
SHROOM3Q8TF72 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SHROOM3Q8TF72 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SHROOM3Q8TF72 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.96□□□□□ -1.45
SHROOM3Q8TF72 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.96□□□□□ -1.45
SHROOM3Q8TF72 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
SHROOM3Q8TF72 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
SHROOM3Q8TF72 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
SHROOM3Q8TF72 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.96□□□□□ -1.45
SHROOM3Q8TF72 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 RNU1-59P-201ENST00000364829 162 ntBASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SHROOM3Q8TF72 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms