Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 HSPD1P10-201ENST00000404829 1676 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AP000776.1-201ENST00000530032 1663 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC005539.1-201ENST00000443768 1479 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 OR9G4-201ENST00000302957 984 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 RNU6-780P-201ENST00000391030 104 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC104297.1-201ENST00000393779 870 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AL096711.1-201ENST00000404780 554 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC092042.2-201ENST00000417304 331 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC009362.1-201ENST00000427253 406 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 SAR1AP4-201ENST00000429225 591 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 MTCYBP45-201ENST00000435243 565 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC079776.3-201ENST00000450665 370 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 WBP1LP1-201ENST00000460451 896 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC072039.1-201ENST00000477611 581 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC233724.1-201ENST00000503894 233 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC026801.2-201ENST00000515352 425 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 TRMT10BP1-201ENST00000519377 943 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC130366.1-201ENST00000526505 1192 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 RN7SL835P-201ENST00000579920 262 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC016629.2-201ENST00000597341 199 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC009027.1-201ENST00000604510 479 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AL096855.2-201ENST00000605785 369 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AL132765.2-201ENST00000610812 351 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC120349.2-201ENST00000625002 298 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AL390195.2-201ENST00000564771 2023 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC105046.1-201ENST00000566457 4997 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
NPAS3Q8IXF0 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.84□□□□□ -1.16
NPAS3Q8IXF0 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
NPAS3Q8IXF0 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 Y_RNA.67-201ENST00000362870 100 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 RNA5SP429-201ENST00000363688 109 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 RN7SKP36-201ENST00000363997 312 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 RPSAP72-201ENST00000407020 358 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AL355862.1-201ENST00000412705 353 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AL662791.3-201ENST00000413771 776 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AL139421.1-201ENST00000423010 169 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms