Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC097499.1-201ENST00000444277 208 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC130509.1-201ENST00000464158 433 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 RPL7AP56-201ENST00000476420 791 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC108688.1-201ENST00000485817 713 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 NIFKP7-201ENST00000503365 834 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC026412.2-201ENST00000512270 1075 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 CYP4F27P-201ENST00000514557 494 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 THAP2-202ENST00000547843 672 ntTSL 2 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 OR4N1P-201ENST00000554847 949 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 NIFKP8-201ENST00000560500 874 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 SUGT1P3-202ENST00000604259 383 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC023513.1-201ENST00000604396 691 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC087623.4-201ENST00000606593 695 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC006504.8-201ENST00000621046 635 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC116563.2-201ENST00000624751 535 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AL078596.1-201ENST00000624856 447 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC134503.1-201ENST00000633048 54 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 CRYM-AS1-204ENST00000637983 556 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 GUCY2GP-201ENST00000479705 3222 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 SNORA7B-201ENST00000384360 139 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 RAB28P1-201ENST00000411517 641 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 NENFP1-201ENST00000419476 466 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 SNX18P9-201ENST00000440580 835 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AL831737.1-201ENST00000441288 271 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 EFCAB14P1-201ENST00000442409 463 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AC239798.1-201ENST00000449024 1176 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 RN7SL445P-201ENST00000495609 293 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 NMNAT1P4-201ENST00000505598 840 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AC026782.1-201ENST00000512952 449 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 TRMT10BP1-201ENST00000519377 943 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AP000435.1-201ENST00000528539 496 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AC087276.1-201ENST00000529659 480 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 SRMP2-201ENST00000553832 916 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 AC142086.3-201ENST00000563896 802 ntBASIC8.3□□□□□ -1.08
SCUBE3Q8IX30 MTCYBP13-201ENST00000578634 1093 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms