Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC027088.4-201ENST00000611559 1947 ntBASIC5.97□□□□□ -1.45
CDKL3Q8IVW4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDKL3Q8IVW4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDKL3Q8IVW4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDKL3Q8IVW4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDKL3Q8IVW4 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDKL3Q8IVW4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
CDKL3Q8IVW4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CDKL3Q8IVW4 AC104966.1-201ENST00000467010 1464 ntBASIC5.96□□□□□ -1.45
CDKL3Q8IVW4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.96□□□□□ -1.45
CDKL3Q8IVW4 AC138907.8-201ENST00000623981 2256 ntBASIC5.96□□□□□ -1.45
CDKL3Q8IVW4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CDKL3Q8IVW4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CDKL3Q8IVW4 AL137058.3-201ENST00000624531 3099 ntBASIC5.96□□□□□ -1.45
CDKL3Q8IVW4 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.96□□□□□ -1.45
CDKL3Q8IVW4 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 RN7SKP171-201ENST00000364417 303 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 RNU11-201ENST00000387069 134 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 AC117434.1-201ENST00000419971 836 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 REREP1Y-201ENST00000422655 198 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 REREP2Y-201ENST00000439103 200 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 ATP5LP2-201ENST00000440646 311 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 EIF5AP4-201ENST00000441206 465 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 OR7E116P-201ENST00000448529 957 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 AC068228.1-201ENST00000461723 211 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 AC023194.2-201ENST00000465398 406 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 EIF4E2P2-201ENST00000492033 736 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 OR8Q1P-201ENST00000526467 655 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 AC084824.2-201ENST00000548906 345 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 AC007956.1-201ENST00000555623 542 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 AC002310.3-201ENST00000569728 723 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 AL360012.1-201ENST00000602813 131 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 AC009237.12-201ENST00000604755 742 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 AC091167.5-201ENST00000605689 894 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 AP001437.1-201ENST00000608783 456 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 AC108673.3-201ENST00000609183 335 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 AP001052.1-201ENST00000626421 99 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 AC004076.2-201ENST00000620532 3323 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 MFSD8-219ENST00000641228 2559 ntBASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CDKL3Q8IVW4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 RNFT1P3-201ENST00000340898 1052 ntBASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 MIR1275-201ENST00000408770 80 ntBASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 AL354868.1-201ENST00000417077 482 ntBASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 EEF1B2P3-201ENST00000447718 678 ntBASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 PPIAP27-201ENST00000453800 265 ntBASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 OR7E157P-201ENST00000494376 911 ntBASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 AC026782.2-201ENST00000510845 636 ntBASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 AL845552.1-201ENST00000556820 323 ntBASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 AC008507.3-201ENST00000585753 472 ntBASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 AL353729.2-201ENST00000605859 1249 ntBASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 AF287957.1-201ENST00000607368 1595 ntBASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 MIR6793-201ENST00000612376 63 ntBASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.95□□□□□ -1.46
CDKL3Q8IVW4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.94□□□□□ -1.46
CDKL3Q8IVW4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDKL3Q8IVW4 PPBPP2-201ENST00000513150 1362 ntBASIC5.94□□□□□ -1.46
CDKL3Q8IVW4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CDKL3Q8IVW4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms