Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC005084.1-201ENST00000605160 304 ntBASIC4.5□□□□□ -1.69
VPS13CQ709C8 AC090527.3-201ENST00000619041 548 ntBASIC4.5□□□□□ -1.69
VPS13CQ709C8 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 PARP4P1-201ENST00000435945 2337 ntBASIC4.5□□□□□ -1.69
VPS13CQ709C8 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 PPIP5K1-202ENST00000348806 5433 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 DAB1-206ENST00000414851 5168 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 AL596266.1-201ENST00000448132 400 ntBASIC4.5□□□□□ -1.69
VPS13CQ709C8 HNRNPDLP2-201ENST00000455248 751 ntBASIC4.5□□□□□ -1.69
VPS13CQ709C8 AC011497.2-201ENST00000600255 639 ntBASIC4.5□□□□□ -1.69
VPS13CQ709C8 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 LAMA3-201ENST00000269217 5671 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 RNA5SP91-201ENST00000390902 119 ntBASIC4.5□□□□□ -1.69
VPS13CQ709C8 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 FAM96AP1-201ENST00000430879 482 ntBASIC4.5□□□□□ -1.69
VPS13CQ709C8 PRPF38AP2-201ENST00000438179 851 ntBASIC4.5□□□□□ -1.69
VPS13CQ709C8 RN7SL352P-201ENST00000466002 277 ntBASIC4.5□□□□□ -1.69
VPS13CQ709C8 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 IGBP1P5-201ENST00000507524 1000 ntBASIC4.5□□□□□ -1.69
VPS13CQ709C8 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 AC015660.5-201ENST00000623238 564 ntBASIC4.5□□□□□ -1.69
VPS13CQ709C8 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 RGPD5-201ENST00000016946 7253 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 AC008555.2-202ENST00000601776 5302 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 AC034229.2-201ENST00000566945 2508 ntBASIC4.49□□□□□ -1.69
VPS13CQ709C8 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS13CQ709C8 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS13CQ709C8 RPL34P20-201ENST00000442771 351 ntBASIC4.49□□□□□ -1.69
VPS13CQ709C8 AC104634.1-201ENST00000452720 462 ntBASIC4.49□□□□□ -1.69
VPS13CQ709C8 CYP4F27P-201ENST00000514557 494 ntBASIC4.49□□□□□ -1.69
VPS13CQ709C8 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 AC091193.1-201ENST00000604640 448 ntBASIC4.49□□□□□ -1.69
VPS13CQ709C8 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS13CQ709C8 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS13CQ709C8 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS13CQ709C8 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS13CQ709C8 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS13CQ709C8 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 PDP2-201ENST00000311765 7146 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS13CQ709C8 AC007559.1-201ENST00000428736 355 ntBASIC4.49□□□□□ -1.69
VPS13CQ709C8 AC021006.3-201ENST00000530771 192 ntBASIC4.49□□□□□ -1.69
VPS13CQ709C8 MIR3160-1-201ENST00000577972 85 ntBASIC4.49□□□□□ -1.69
VPS13CQ709C8 MIR1254-2-201ENST00000579553 63 ntBASIC4.49□□□□□ -1.69
VPS13CQ709C8 AP001521.2-201ENST00000608772 546 ntBASIC4.49□□□□□ -1.69
VPS13CQ709C8 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 AC016717.3-201ENST00000624730 554 ntBASIC4.49□□□□□ -1.69
VPS13CQ709C8 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS13CQ709C8 AC092747.4-201ENST00000620519 1861 ntBASIC4.49□□□□□ -1.69
VPS13CQ709C8 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 MED12-203ENST00000374102 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS13CQ709C8 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS13CQ709C8 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS13CQ709C8 SLC6A15-201ENST00000266682 4879 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS13CQ709C8 PAX6-231ENST00000606377 6901 ntAPPRIS P4 TSL 5 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 DHFRP1-201ENST00000579682 559 ntBASIC4.49□□□□□ -1.69
VPS13CQ709C8 AC005377.1-201ENST00000605126 456 ntBASIC4.49□□□□□ -1.69
VPS13CQ709C8 NANOGP3-201ENST00000605855 286 ntBASIC4.49□□□□□ -1.69
VPS13CQ709C8 AC073575.2-201ENST00000614212 627 ntBASIC4.49□□□□□ -1.69
VPS13CQ709C8 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
VPS13CQ709C8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS13CQ709C8 ZNF733P-202ENST00000444809 1573 ntBASIC4.48□□□□□ -1.69
VPS13CQ709C8 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms