Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 NEPNP-201ENST00000404786 1371 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AC245060.4-201ENST00000413293 1121 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AC099677.3-201ENST00000427081 395 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AP006222.1-205ENST00000450734 457 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AC011476.1-201ENST00000466725 307 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 RN7SL57P-201ENST00000493687 290 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 CYP4F27P-201ENST00000514557 494 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AC022826.1-201ENST00000519383 805 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 IGLV3-30-201ENST00000524362 298 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 OR7E158P-201ENST00000524483 910 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 NPM1P5-201ENST00000557228 838 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AL356801.1-201ENST00000559320 294 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 TXNP4-201ENST00000575018 310 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 MIR3614-201ENST00000581261 86 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AC090220.1-201ENST00000593078 1699 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AL049840.6-201ENST00000604583 345 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 AC009120.7-201ENST00000623452 780 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 OR11H2-202ENST00000641517 1085 ntBASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RFWD3Q6PCD5 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 RNA5SP500-201ENST00000364486 119 ntBASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 RPS4XP5-201ENST00000419038 768 ntBASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 AC126120.1-201ENST00000431082 470 ntBASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 RPS12P17-201ENST00000438591 377 ntBASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 AL512637.1-201ENST00000439523 1231 ntBASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 AL162739.1-201ENST00000450606 307 ntBASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 AC016724.1-201ENST00000453215 421 ntBASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 AC093166.4-201ENST00000457867 318 ntBASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 AC136777.2-201ENST00000522979 358 ntBASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 GARSP1-201ENST00000570895 719 ntBASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 FAM27E4-201ENST00000605259 342 ntBASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 AC026124.2-201ENST00000621847 656 ntBASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 OR8G3P-202ENST00000641572 1255 ntBASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
RFWD3Q6PCD5 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 SAMM50P1-201ENST00000455403 1399 ntBASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 RNA5SP211-201ENST00000365516 117 ntBASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 AC016739.1-201ENST00000405359 345 ntBASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 RN7SKP17-201ENST00000411242 351 ntBASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 MYL6P5-201ENST00000412707 459 ntBASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.1□□□□□ -1.43
RFWD3Q6PCD5 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms