Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RNA5SP319-201ENST00000362768 119 ntBASIC5.65□□□□□ -1.5
RIF1Q5UIP0 AL023284.3-201ENST00000407767 334 ntBASIC5.65□□□□□ -1.5
RIF1Q5UIP0 AC019050.1-201ENST00000418508 492 ntBASIC5.65□□□□□ -1.5
RIF1Q5UIP0 OR2AM1P-201ENST00000422137 422 ntBASIC5.65□□□□□ -1.5
RIF1Q5UIP0 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 SDC4P-201ENST00000453285 601 ntBASIC5.65□□□□□ -1.5
RIF1Q5UIP0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 GARSP1-201ENST00000570895 719 ntBASIC5.65□□□□□ -1.5
RIF1Q5UIP0 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 AC034229.6-201ENST00000623704 224 ntBASIC5.65□□□□□ -1.5
RIF1Q5UIP0 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC5.65□□□□□ -1.5
RIF1Q5UIP0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RIF1Q5UIP0 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.65□□□□□ -1.51
RIF1Q5UIP0 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RIF1Q5UIP0 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
RIF1Q5UIP0 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RIF1Q5UIP0 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RIF1Q5UIP0 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC5.65□□□□□ -1.51
RIF1Q5UIP0 ARHGAP42P2-201ENST00000416089 2140 ntBASIC5.65□□□□□ -1.51
RIF1Q5UIP0 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.65□□□□□ -1.51
RIF1Q5UIP0 GUCY1B2-204ENST00000531898 1979 ntBASIC5.65□□□□□ -1.51
RIF1Q5UIP0 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.65□□□□□ -1.51
RIF1Q5UIP0 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.65□□□□□ -1.51
RIF1Q5UIP0 AL390774.1-201ENST00000411924 246 ntBASIC5.65□□□□□ -1.51
RIF1Q5UIP0 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.65□□□□□ -1.51
RIF1Q5UIP0 TDGF1P1-201ENST00000445734 527 ntBASIC5.65□□□□□ -1.51
RIF1Q5UIP0 NUTF2P7-201ENST00000453086 375 ntBASIC5.65□□□□□ -1.51
RIF1Q5UIP0 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.65□□□□□ -1.51
RIF1Q5UIP0 RNU6-941P-201ENST00000516346 108 ntBASIC5.65□□□□□ -1.51
RIF1Q5UIP0 GLRXP2-201ENST00000555594 321 ntBASIC5.65□□□□□ -1.51
RIF1Q5UIP0 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.65□□□□□ -1.51
RIF1Q5UIP0 AC000068.2-201ENST00000608816 460 ntBASIC5.65□□□□□ -1.51
RIF1Q5UIP0 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
RIF1Q5UIP0 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
RIF1Q5UIP0 AC092111.1-201ENST00000618256 3358 ntBASIC5.65□□□□□ -1.51
RIF1Q5UIP0 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 RNU1-32P-201ENST00000363937 159 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 RNU4-4P-201ENST00000364588 130 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 RPL5P5-201ENST00000392009 893 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AC019205.1-201ENST00000421830 730 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 CYCSP6-201ENST00000434498 302 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 RPL5P9-201ENST00000448118 886 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AC091180.1-201ENST00000462104 372 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AC069307.1-201ENST00000602820 447 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AL139099.4-201ENST00000614802 114 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AC091905.4-201ENST00000623432 202 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 CYP4F35P-202ENST00000636121 390 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AL008638.3-201ENST00000623027 5182 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 RNA5SP91-201ENST00000390902 119 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AC093162.1-201ENST00000419682 124 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 DUTP4-201ENST00000424782 475 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AC099677.3-201ENST00000427081 395 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 DNAJC19P7-201ENST00000428811 344 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 MIR3189-201ENST00000578735 73 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 AC020910.2-201ENST00000603635 610 ntBASIC5.64□□□□□ -1.51
RIF1Q5UIP0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.64□□□□□ -1.51
RIF1Q5UIP0 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.63□□□□□ -1.51
RIF1Q5UIP0 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms