Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC010547.7-201ENST00000570323 333 ntBASIC5.85□□□□□ -1.47
CDK3Q00526 TXNP4-201ENST00000575018 310 ntBASIC5.85□□□□□ -1.47
CDK3Q00526 MIR3614-201ENST00000581261 86 ntBASIC5.85□□□□□ -1.47
CDK3Q00526 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK3Q00526 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDK3Q00526 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDK3Q00526 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK3Q00526 FAM27E4-201ENST00000605259 342 ntBASIC5.85□□□□□ -1.47
CDK3Q00526 RPL12P48-201ENST00000605620 304 ntBASIC5.85□□□□□ -1.47
CDK3Q00526 AC117490.2-201ENST00000610042 594 ntBASIC5.85□□□□□ -1.47
CDK3Q00526 AL139099.4-201ENST00000614802 114 ntBASIC5.85□□□□□ -1.47
CDK3Q00526 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK3Q00526 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CDK3Q00526 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDK3Q00526 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDK3Q00526 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CDK3Q00526 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDK3Q00526 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CDK3Q00526 CDY11P-201ENST00000447168 1651 ntBASIC5.85□□□□□ -1.47
CDK3Q00526 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDK3Q00526 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CDK3Q00526 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CDK3Q00526 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK3Q00526 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK3Q00526 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
CDK3Q00526 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK3Q00526 NEPNP-201ENST00000404786 1371 ntBASIC5.84□□□□□ -1.47
CDK3Q00526 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK3Q00526 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK3Q00526 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK3Q00526 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK3Q00526 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK3Q00526 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CDK3Q00526 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.84□□□□□ -1.47
CDK3Q00526 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK3Q00526 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
CDK3Q00526 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK3Q00526 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CDK3Q00526 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK3Q00526 MTND6P12-201ENST00000428247 522 ntBASIC5.84□□□□□ -1.47
CDK3Q00526 AC126120.1-201ENST00000431082 470 ntBASIC5.84□□□□□ -1.47
CDK3Q00526 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK3Q00526 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.84□□□□□ -1.47
CDK3Q00526 UBFD1P1-201ENST00000473259 814 ntBASIC5.84□□□□□ -1.47
CDK3Q00526 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK3Q00526 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK3Q00526 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK3Q00526 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.84□□□□□ -1.47
CDK3Q00526 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.84□□□□□ -1.47
CDK3Q00526 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
CDK3Q00526 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK3Q00526 DPPA3P2-202ENST00000557188 1219 ntBASIC5.84□□□□□ -1.47
CDK3Q00526 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK3Q00526 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.84□□□□□ -1.47
CDK3Q00526 GARSP1-201ENST00000570895 719 ntBASIC5.84□□□□□ -1.47
CDK3Q00526 AC145423.1-201ENST00000605712 336 ntBASIC5.84□□□□□ -1.47
CDK3Q00526 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK3Q00526 AP005431.1-201ENST00000618479 319 ntBASIC5.84□□□□□ -1.47
CDK3Q00526 AC026124.2-201ENST00000621847 656 ntBASIC5.84□□□□□ -1.47
CDK3Q00526 AL353684.1-201ENST00000622677 1120 ntBASIC5.84□□□□□ -1.47
CDK3Q00526 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK3Q00526 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK3Q00526 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK3Q00526 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
CDK3Q00526 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK3Q00526 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK3Q00526 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CDK3Q00526 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CDK3Q00526 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.84□□□□□ -1.48
CDK3Q00526 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK3Q00526 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK3Q00526 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK3Q00526 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.83□□□□□ -1.48
CDK3Q00526 AC011504.1-201ENST00000623331 4103 ntBASIC5.83□□□□□ -1.48
CDK3Q00526 AL929601.4-201ENST00000613011 1341 ntBASIC5.83□□□□□ -1.48
CDK3Q00526 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDK3Q00526 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK3Q00526 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CDK3Q00526 AL031985.1-201ENST00000392713 418 ntBASIC5.83□□□□□ -1.48
CDK3Q00526 OR7E101P-201ENST00000400428 513 ntBASIC5.83□□□□□ -1.48
CDK3Q00526 RPS3AP2-201ENST00000407190 754 ntBASIC5.83□□□□□ -1.48
CDK3Q00526 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDK3Q00526 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK3Q00526 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK3Q00526 EEF1B2P8-201ENST00000414101 671 ntBASIC5.83□□□□□ -1.48
CDK3Q00526 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK3Q00526 AC104843.2-201ENST00000427666 297 ntBASIC5.83□□□□□ -1.48
CDK3Q00526 RPL34P27-201ENST00000428810 349 ntBASIC5.83□□□□□ -1.48
CDK3Q00526 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK3Q00526 RPS12P17-201ENST00000438591 377 ntBASIC5.83□□□□□ -1.48
CDK3Q00526 AL663074.2-201ENST00000440621 479 ntBASIC5.83□□□□□ -1.48
CDK3Q00526 AL445665.1-202ENST00000452436 324 ntBASIC5.83□□□□□ -1.48
CDK3Q00526 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK3Q00526 AC093166.4-201ENST00000457867 318 ntBASIC5.83□□□□□ -1.48
CDK3Q00526 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK3Q00526 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK3Q00526 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
CDK3Q00526 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK3Q00526 AC008429.4-201ENST00000521201 182 ntBASIC5.83□□□□□ -1.48
CDK3Q00526 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms