Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
SRP9P49458 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SRP9P49458 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.21□□□□□ -1.58
SRP9P49458 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
SRP9P49458 SNORA21-201ENST00000362423 132 ntBASIC5.21□□□□□ -1.58
SRP9P49458 RNU1-134P-201ENST00000362935 165 ntBASIC5.21□□□□□ -1.58
SRP9P49458 RNU1-65P-201ENST00000363919 148 ntBASIC5.21□□□□□ -1.58
SRP9P49458 RN7SKP128-201ENST00000364270 303 ntBASIC5.21□□□□□ -1.58
SRP9P49458 RN7SKP187-201ENST00000365536 330 ntBASIC5.21□□□□□ -1.58
SRP9P49458 SNORA5.1-201ENST00000384275 131 ntBASIC5.21□□□□□ -1.58
SRP9P49458 EI24P3-201ENST00000399046 1062 ntBASIC5.21□□□□□ -1.58
SRP9P49458 AL132875.1-201ENST00000403623 949 ntBASIC5.21□□□□□ -1.58
SRP9P49458 GCNT1P4-201ENST00000404096 329 ntBASIC5.21□□□□□ -1.58
SRP9P49458 AL445213.1-201ENST00000412589 747 ntBASIC5.21□□□□□ -1.58
SRP9P49458 AC138761.5-201ENST00000433967 325 ntBASIC5.21□□□□□ -1.58
SRP9P49458 SEPT14P12-201ENST00000442280 560 ntBASIC5.21□□□□□ -1.58
SRP9P49458 TRIM60P16-201ENST00000444048 694 ntBASIC5.21□□□□□ -1.58
SRP9P49458 RPL23AP60-201ENST00000450011 454 ntBASIC5.21□□□□□ -1.58
SRP9P49458 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.21□□□□□ -1.58
SRP9P49458 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SRP9P49458 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SRP9P49458 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SRP9P49458 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.21□□□□□ -1.58
SRP9P49458 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.21□□□□□ -1.58
SRP9P49458 OR56A7P-201ENST00000524865 941 ntBASIC5.21□□□□□ -1.58
SRP9P49458 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.21□□□□□ -1.58
SRP9P49458 AC084121.1-201ENST00000533882 835 ntBASIC5.21□□□□□ -1.58
SRP9P49458 AC026826.3-201ENST00000561747 158 ntBASIC5.21□□□□□ -1.58
SRP9P49458 AC007346.1-201ENST00000569208 867 ntBASIC5.21□□□□□ -1.58
SRP9P49458 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.21□□□□□ -1.58
SRP9P49458 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.21□□□□□ -1.58
SRP9P49458 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SRP9P49458 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.21□□□□□ -1.58
SRP9P49458 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SRP9P49458 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.21□□□□□ -1.58
SRP9P49458 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.21□□□□□ -1.58
SRP9P49458 AC141002.1-201ENST00000607025 279 ntBASIC5.21□□□□□ -1.58
SRP9P49458 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.21□□□□□ -1.58
SRP9P49458 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SRP9P49458 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.21□□□□□ -1.58
SRP9P49458 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.21□□□□□ -1.58
SRP9P49458 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SRP9P49458 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SRP9P49458 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SRP9P49458 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.21□□□□□ -1.58
SRP9P49458 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SRP9P49458 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.21□□□□□ -1.58
SRP9P49458 AC093849.1-201ENST00000563631 2209 ntBASIC5.2□□□□□ -1.58
SRP9P49458 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRP9P49458 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRP9P49458 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SRP9P49458 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRP9P49458 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SRP9P49458 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
SRP9P49458 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SRP9P49458 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.2□□□□□ -1.58
SRP9P49458 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
SRP9P49458 MTCO1P28-201ENST00000574177 1528 ntBASIC5.2□□□□□ -1.58
SRP9P49458 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRP9P49458 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRP9P49458 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SRP9P49458 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRP9P49458 RN7SKP108-201ENST00000411367 328 ntBASIC5.2□□□□□ -1.58
SRP9P49458 PTCD2P2-201ENST00000415579 1095 ntBASIC5.2□□□□□ -1.58
SRP9P49458 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.2□□□□□ -1.58
SRP9P49458 RPS27AP6-201ENST00000427962 448 ntBASIC5.2□□□□□ -1.58
SRP9P49458 RPSAP65-201ENST00000429660 595 ntBASIC5.2□□□□□ -1.58
SRP9P49458 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.2□□□□□ -1.58
SRP9P49458 CUBNP2-201ENST00000443534 1139 ntBASIC5.2□□□□□ -1.58
SRP9P49458 MED28P3-201ENST00000444288 531 ntBASIC5.2□□□□□ -1.58
SRP9P49458 RSU1P1-201ENST00000453416 441 ntBASIC5.2□□□□□ -1.58
SRP9P49458 PPIAP7-201ENST00000454070 489 ntBASIC5.2□□□□□ -1.58
SRP9P49458 RPL12P39-201ENST00000455456 496 ntBASIC5.2□□□□□ -1.58
SRP9P49458 CTSLP6-201ENST00000458273 1002 ntBASIC5.2□□□□□ -1.58
SRP9P49458 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.2□□□□□ -1.58
SRP9P49458 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.2□□□□□ -1.58
SRP9P49458 RN7SL741P-201ENST00000482473 289 ntBASIC5.2□□□□□ -1.58
SRP9P49458 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SRP9P49458 AC083795.1-201ENST00000491760 320 ntBASIC5.2□□□□□ -1.58
SRP9P49458 HSD3BP3-201ENST00000514706 994 ntBASIC5.2□□□□□ -1.58
SRP9P49458 AP000620.1-201ENST00000527147 504 ntBASIC5.2□□□□□ -1.58
SRP9P49458 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.2□□□□□ -1.58
SRP9P49458 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRP9P49458 AC092332.1-201ENST00000563684 829 ntBASIC5.2□□□□□ -1.58
SRP9P49458 MIR4271-201ENST00000582451 67 ntBASIC5.2□□□□□ -1.58
SRP9P49458 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.2□□□□□ -1.58
SRP9P49458 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.2□□□□□ -1.58
SRP9P49458 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.2□□□□□ -1.58
SRP9P49458 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.2□□□□□ -1.58
SRP9P49458 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SRP9P49458 MAPK10-328ENST00000641553 4009 ntBASIC5.2□□□□□ -1.58
SRP9P49458 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.2□□□□□ -1.58
SRP9P49458 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRP9P49458 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.2□□□□□ -1.58
SRP9P49458 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SRP9P49458 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
SRP9P49458 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRP9P49458 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRP9P49458 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SRP9P49458 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms