Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC4.98□□□□□ -1.61
NKX2-1P43699 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-1P43699 AC026956.1-201ENST00000558741 396 ntBASIC4.98□□□□□ -1.61
NKX2-1P43699 HNRNPA1P74-201ENST00000560782 835 ntBASIC4.98□□□□□ -1.61
NKX2-1P43699 AC010287.1-201ENST00000566916 357 ntBASIC4.98□□□□□ -1.61
NKX2-1P43699 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC4.98□□□□□ -1.61
NKX2-1P43699 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC4.98□□□□□ -1.61
NKX2-1P43699 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC4.98□□□□□ -1.61
NKX2-1P43699 RPS11-205ENST00000599561 430 ntTSL 5 BASIC4.98□□□□□ -1.61
NKX2-1P43699 AC005021.1-201ENST00000608730 355 ntBASIC4.98□□□□□ -1.61
NKX2-1P43699 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-1P43699 AL137067.2-201ENST00000621202 131 ntBASIC4.98□□□□□ -1.61
NKX2-1P43699 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC4.98□□□□□ -1.61
NKX2-1P43699 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.98□□□□□ -1.61
NKX2-1P43699 OR7A1P-202ENST00000641542 1158 ntBASIC4.98□□□□□ -1.61
NKX2-1P43699 AC079776.5-201ENST00000641920 211 ntBASIC4.98□□□□□ -1.61
NKX2-1P43699 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-1P43699 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-1P43699 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.98□□□□□ -1.61
NKX2-1P43699 AC010132.4-201ENST00000569883 1368 ntBASIC4.98□□□□□ -1.61
NKX2-1P43699 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-1P43699 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-1P43699 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-1P43699 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC4.98□□□□□ -1.61
NKX2-1P43699 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NKX2-1P43699 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-1P43699 AL136984.1-201ENST00000607611 1893 ntBASIC4.98□□□□□ -1.61
NKX2-1P43699 SPATA2P1-201ENST00000431223 2055 ntBASIC4.98□□□□□ -1.61
NKX2-1P43699 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-1P43699 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-1P43699 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-1P43699 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-1P43699 DDX6P1-205ENST00000441966 1436 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC4.97□□□□□ -1.61
NKX2-1P43699 AC005224.3-201ENST00000584683 2140 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.97□□□□□ -1.61
NKX2-1P43699 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.97□□□□□ -1.61
NKX2-1P43699 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-1P43699 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-1P43699 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-1P43699 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-1P43699 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
NKX2-1P43699 PROS2P-201ENST00000474651 1951 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.97□□□□□ -1.61
NKX2-1P43699 AC114774.1-201ENST00000507410 1770 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NKX2-1P43699 SNORD51.1-201ENST00000365405 77 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 MIR27A-201ENST00000385073 78 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 VIM2P-201ENST00000402383 1294 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.97□□□□□ -1.61
NKX2-1P43699 METTL15P3-201ENST00000415522 1221 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC4.97□□□□□ -1.61
NKX2-1P43699 AC009506.2-201ENST00000420635 840 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 MRPS21P2-201ENST00000424704 264 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.97□□□□□ -1.61
NKX2-1P43699 BX276092.6-201ENST00000430476 250 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 HMGB3P10-201ENST00000434734 572 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-1P43699 RPS10P14-201ENST00000440748 502 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC4.97□□□□□ -1.61
NKX2-1P43699 REG1CP-206ENST00000447469 496 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 BX276092.8-201ENST00000455722 250 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AL133480.2-201ENST00000456723 487 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AC091544.1-201ENST00000484702 348 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AC012123.2-201ENST00000485809 248 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 RPL23AP40-201ENST00000487630 390 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AC090958.1-201ENST00000511122 351 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.97□□□□□ -1.61
NKX2-1P43699 AC111000.6-201ENST00000514471 709 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AC096661.1-201ENST00000515870 822 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 SCARNA11.1-201ENST00000516918 132 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AC067904.2-201ENST00000517322 1283 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 IGHV4-55-201ENST00000520889 368 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC4.97□□□□□ -1.61
NKX2-1P43699 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-1P43699 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC4.97□□□□□ -1.61
NKX2-1P43699 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC4.97□□□□□ -1.61
NKX2-1P43699 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.97□□□□□ -1.61
NKX2-1P43699 AC020978.7-201ENST00000575953 1187 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.97□□□□□ -1.61
NKX2-1P43699 SYPL1P2-201ENST00000582878 727 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC4.97□□□□□ -1.61
NKX2-1P43699 BMS1P7-201ENST00000602440 1052 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AL078624.2-201ENST00000605063 554 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AC114477.1-201ENST00000605097 605 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AC005514.1-201ENST00000623521 208 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AC097372.4-201ENST00000625025 466 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.97□□□□□ -1.61
NKX2-1P43699 AC006453.5-201ENST00000636451 619 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-1P43699 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-1P43699 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-1P43699 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-1P43699 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-1P43699 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.97□□□□□ -1.61
NKX2-1P43699 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
NKX2-1P43699 AL158152.1-201ENST00000602652 1435 ntBASIC4.97□□□□□ -1.61
NKX2-1P43699 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.97□□□□□ -1.61
NKX2-1P43699 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
NKX2-1P43699 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms