Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 DPPA2P2-201ENST00000418220 897 ntBASIC5.84□□□□□ -1.47
HMGCLP35914 AC117434.1-201ENST00000419971 836 ntBASIC5.84□□□□□ -1.47
HMGCLP35914 AC115283.1-201ENST00000427353 400 ntBASIC5.84□□□□□ -1.47
HMGCLP35914 RPL12P16-201ENST00000431098 498 ntBASIC5.84□□□□□ -1.47
HMGCLP35914 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
HMGCLP35914 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.84□□□□□ -1.47
HMGCLP35914 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.84□□□□□ -1.47
HMGCLP35914 DNAJA1P5-201ENST00000440278 943 ntBASIC5.84□□□□□ -1.47
HMGCLP35914 AC015983.1-201ENST00000441577 373 ntBASIC5.84□□□□□ -1.47
HMGCLP35914 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCLP35914 HMGN1P2-201ENST00000445197 310 ntBASIC5.84□□□□□ -1.47
HMGCLP35914 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGCLP35914 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.84□□□□□ -1.47
HMGCLP35914 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.84□□□□□ -1.47
HMGCLP35914 USP9YP2-201ENST00000504503 1000 ntBASIC5.84□□□□□ -1.47
HMGCLP35914 USP9YP1-201ENST00000513521 1002 ntBASIC5.84□□□□□ -1.47
HMGCLP35914 HMGN2P36-201ENST00000529541 409 ntBASIC5.84□□□□□ -1.47
HMGCLP35914 NANOGNBP2-201ENST00000544753 553 ntBASIC5.84□□□□□ -1.47
HMGCLP35914 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGCLP35914 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
HMGCLP35914 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCLP35914 COX6CP7-201ENST00000597056 208 ntBASIC5.84□□□□□ -1.47
HMGCLP35914 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.84□□□□□ -1.47
HMGCLP35914 MIR1910-201ENST00000636955 80 ntBASIC5.84□□□□□ -1.47
HMGCLP35914 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.84□□□□□ -1.47
HMGCLP35914 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCLP35914 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
HMGCLP35914 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.84□□□□□ -1.47
HMGCLP35914 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCLP35914 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
HMGCLP35914 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
HMGCLP35914 AC093671.1-201ENST00000624981 2929 ntBASIC5.84□□□□□ -1.48
HMGCLP35914 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HMGCLP35914 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HMGCLP35914 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
HMGCLP35914 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCLP35914 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCLP35914 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HMGCLP35914 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGCLP35914 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCLP35914 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCLP35914 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCLP35914 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGCLP35914 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCLP35914 FBXL21-201ENST00000297158 1305 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
HMGCLP35914 AC087516.1-201ENST00000561236 2428 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
HMGCLP35914 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
HMGCLP35914 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGCLP35914 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGCLP35914 TMSB4XP2-201ENST00000335179 210 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HMGCLP35914 RN7SKP29-201ENST00000410957 272 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.83□□□□□ -1.48
HMGCLP35914 AC019205.1-201ENST00000421830 730 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 PCBP2P1-201ENST00000437262 977 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.83□□□□□ -1.48
HMGCLP35914 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCLP35914 RSU1P1-201ENST00000453416 441 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 ACA64.1-201ENST00000459171 127 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 RPS17P15-201ENST00000475609 349 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 AC006539.1-201ENST00000481419 501 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.83□□□□□ -1.48
HMGCLP35914 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.83□□□□□ -1.48
HMGCLP35914 RNA5SP271-201ENST00000516700 88 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCLP35914 AC068305.2-201ENST00000550567 1205 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.83□□□□□ -1.48
HMGCLP35914 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCLP35914 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCLP35914 AC016839.1-201ENST00000578162 867 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCLP35914 LSM1P2-201ENST00000604911 322 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 AL137246.1-201ENST00000607072 977 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 AC129915.3-201ENST00000634128 948 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGCLP35914 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCLP35914 AL355834.1-201ENST00000556602 3965 ntBASIC5.83□□□□□ -1.48
HMGCLP35914 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HMGCLP35914 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCLP35914 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCLP35914 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCLP35914 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
HMGCLP35914 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCLP35914 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HMGCLP35914 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCLP35914 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCLP35914 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCLP35914 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGCLP35914 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
HMGCLP35914 AC117409.1-201ENST00000470499 1310 ntBASIC5.82□□□□□ -1.48
HMGCLP35914 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
HMGCLP35914 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGCLP35914 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCLP35914 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
HMGCLP35914 OR7E25P-201ENST00000344844 931 ntBASIC5.82□□□□□ -1.48
HMGCLP35914 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms