Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 HSPD1P8-201ENST00000400121 1658 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXA9P31269 SNORD8-201ENST00000363915 110 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 MIR105-2-201ENST00000385083 81 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 RN7SKP278-201ENST00000410504 342 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 NPM1P4-201ENST00000414095 812 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 Z93019.1-201ENST00000416450 973 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 AC007568.1-201ENST00000422912 471 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 TNPO1P1-201ENST00000423641 1138 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 HMGB3P24-201ENST00000433260 622 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 AC005297.1-201ENST00000444765 862 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 EEF1B2P6-201ENST00000445713 673 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXA9P31269 RPS3AP15-201ENST00000483874 781 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 AC008945.1-201ENST00000505144 499 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXA9P31269 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.15□□□□□ -1.42
HOXA9P31269 IGLV2-28-201ENST00000520681 304 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXA9P31269 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXA9P31269 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXA9P31269 AC007494.1-201ENST00000562293 760 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXA9P31269 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXA9P31269 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXA9P31269 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HOXA9P31269 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
HOXA9P31269 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXA9P31269 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXA9P31269 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXA9P31269 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXA9P31269 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HOXA9P31269 AP004289.1-201ENST00000436307 2205 ntBASIC6.15□□□□□ -1.43
HOXA9P31269 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXA9P31269 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
HOXA9P31269 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.15□□□□□ -1.43
HOXA9P31269 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
HOXA9P31269 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
HOXA9P31269 AC009779.8-201ENST00000641684 4384 ntBASIC6.15□□□□□ -1.43
HOXA9P31269 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
HOXA9P31269 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA9P31269 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HOXA9P31269 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXA9P31269 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.14□□□□□ -1.43
HOXA9P31269 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA9P31269 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA9P31269 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA9P31269 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA9P31269 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA9P31269 OR9K1P-201ENST00000326513 941 ntBASIC6.14□□□□□ -1.43
HOXA9P31269 RN7SKP151-201ENST00000410230 316 ntBASIC6.14□□□□□ -1.43
HOXA9P31269 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXA9P31269 AL355433.1-201ENST00000422804 300 ntBASIC6.14□□□□□ -1.43
HOXA9P31269 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXA9P31269 AC113412.1-201ENST00000425840 504 ntBASIC6.14□□□□□ -1.43
HOXA9P31269 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXA9P31269 AL627308.1-201ENST00000435693 821 ntBASIC6.14□□□□□ -1.43
HOXA9P31269 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXA9P31269 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXA9P31269 AL022319.1-201ENST00000458183 1167 ntBASIC6.14□□□□□ -1.43
HOXA9P31269 SIAH1P1-201ENST00000479411 923 ntBASIC6.14□□□□□ -1.43
HOXA9P31269 BX510359.5-201ENST00000515651 304 ntBASIC6.14□□□□□ -1.43
HOXA9P31269 RNA5SP34-201ENST00000516887 130 ntBASIC6.14□□□□□ -1.43
HOXA9P31269 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HOXA9P31269 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXA9P31269 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA9P31269 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXA9P31269 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.14□□□□□ -1.43
HOXA9P31269 AC090651.1-201ENST00000567865 634 ntBASIC6.14□□□□□ -1.43
HOXA9P31269 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXA9P31269 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXA9P31269 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXA9P31269 AC020763.5-201ENST00000623298 430 ntBASIC6.14□□□□□ -1.43
HOXA9P31269 AC119674.1-217ENST00000641942 1086 ntBASIC6.14□□□□□ -1.43
HOXA9P31269 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA9P31269 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA9P31269 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA9P31269 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA9P31269 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA9P31269 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXA9P31269 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA9P31269 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA9P31269 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA9P31269 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA9P31269 SNX18P3-202ENST00000565670 1750 ntBASIC6.13□□□□□ -1.43
HOXA9P31269 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA9P31269 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HOXA9P31269 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA9P31269 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA9P31269 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA9P31269 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA9P31269 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
HOXA9P31269 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA9P31269 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.13□□□□□ -1.43
HOXA9P31269 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
HOXA9P31269 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXA9P31269 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXA9P31269 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.13□□□□□ -1.43
HOXA9P31269 H3F3BP1-201ENST00000440551 403 ntBASIC6.13□□□□□ -1.43
HOXA9P31269 CUBNP2-201ENST00000443534 1139 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms