Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AP004607.3-201ENST00000530354 3915 ntBASIC6.73□□□□□ -1.33
COL4A5P29400 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A5P29400 AL391262.1-201ENST00000556558 1992 ntBASIC6.73□□□□□ -1.33
COL4A5P29400 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A5P29400 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.73□□□□□ -1.33
COL4A5P29400 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A5P29400 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A5P29400 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A5P29400 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A5P29400 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A5P29400 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.73□□□□□ -1.33
COL4A5P29400 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A5P29400 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
COL4A5P29400 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A5P29400 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
COL4A5P29400 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
COL4A5P29400 AC114947.2-201ENST00000565748 2125 ntBASIC6.72□□□□□ -1.33
COL4A5P29400 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A5P29400 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.72□□□□□ -1.33
COL4A5P29400 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A5P29400 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
COL4A5P29400 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A5P29400 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.72□□□□□ -1.33
COL4A5P29400 AC016027.5-201ENST00000427227 210 ntBASIC6.72□□□□□ -1.33
COL4A5P29400 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A5P29400 GSTA7P-201ENST00000438425 448 ntBASIC6.72□□□□□ -1.33
COL4A5P29400 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A5P29400 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A5P29400 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.72□□□□□ -1.33
COL4A5P29400 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A5P29400 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.72□□□□□ -1.33
COL4A5P29400 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.72□□□□□ -1.33
COL4A5P29400 RN7SL346P-201ENST00000491561 294 ntBASIC6.72□□□□□ -1.33
COL4A5P29400 RN7SKP99-201ENST00000517028 307 ntBASIC6.72□□□□□ -1.33
COL4A5P29400 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.72□□□□□ -1.33
COL4A5P29400 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.72□□□□□ -1.33
COL4A5P29400 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
COL4A5P29400 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.72□□□□□ -1.33
COL4A5P29400 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A5P29400 AC105105.5-201ENST00000622635 1294 ntBASIC6.72□□□□□ -1.33
COL4A5P29400 AP002991.2-201ENST00000623807 2801 ntBASIC6.72□□□□□ -1.33
COL4A5P29400 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
COL4A5P29400 AC104447.1-201ENST00000624214 2124 ntBASIC6.72□□□□□ -1.33
COL4A5P29400 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A5P29400 OR55B1P-203ENST00000641518 2602 ntBASIC6.72□□□□□ -1.33
COL4A5P29400 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.72□□□□□ -1.33
COL4A5P29400 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A5P29400 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A5P29400 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.71□□□□□ -1.33
COL4A5P29400 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COL4A5P29400 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL4A5P29400 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.71□□□□□ -1.33
COL4A5P29400 FAM96AP1-201ENST00000430879 482 ntBASIC6.71□□□□□ -1.33
COL4A5P29400 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.71□□□□□ -1.33
COL4A5P29400 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COL4A5P29400 RPS3AP53-201ENST00000454716 778 ntBASIC6.71□□□□□ -1.33
COL4A5P29400 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.71□□□□□ -1.33
COL4A5P29400 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.71□□□□□ -1.33
COL4A5P29400 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.71□□□□□ -1.33
COL4A5P29400 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.71□□□□□ -1.33
COL4A5P29400 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.71□□□□□ -1.33
COL4A5P29400 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.71□□□□□ -1.33
COL4A5P29400 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.71□□□□□ -1.33
COL4A5P29400 AC020765.1-201ENST00000604296 328 ntBASIC6.71□□□□□ -1.33
COL4A5P29400 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COL4A5P29400 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
COL4A5P29400 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
COL4A5P29400 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
COL4A5P29400 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.71□□□□□ -1.34
COL4A5P29400 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A5P29400 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.71□□□□□ -1.34
COL4A5P29400 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A5P29400 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A5P29400 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A5P29400 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A5P29400 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.71□□□□□ -1.34
COL4A5P29400 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
COL4A5P29400 MALAT1-202ENST00000534336 8708 ntBASIC6.71□□□□□ -1.34
COL4A5P29400 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A5P29400 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A5P29400 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.71□□□□□ -1.34
COL4A5P29400 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.71□□□□□ -1.34
COL4A5P29400 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.71□□□□□ -1.34
COL4A5P29400 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.71□□□□□ -1.34
COL4A5P29400 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.71□□□□□ -1.34
COL4A5P29400 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.71□□□□□ -1.34
COL4A5P29400 AC091193.1-201ENST00000604640 448 ntBASIC6.71□□□□□ -1.34
COL4A5P29400 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.71□□□□□ -1.34
COL4A5P29400 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.71□□□□□ -1.34
COL4A5P29400 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A5P29400 CASC19-281ENST00000642118 1554 ntBASIC6.7□□□□□ -1.34
COL4A5P29400 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A5P29400 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A5P29400 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.7□□□□□ -1.34
COL4A5P29400 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
COL4A5P29400 AL034549.2-201ENST00000618285 3373 ntBASIC6.7□□□□□ -1.34
COL4A5P29400 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A5P29400 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A5P29400 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
COL4A5P29400 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms