Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC011411.1-201ENST00000509592 876 ntBASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 AC106872.4-201ENST00000510050 523 ntBASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 OR56A7P-201ENST00000524865 941 ntBASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 OR6M2P-201ENST00000529831 871 ntBASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 COX6CP7-201ENST00000597056 208 ntBASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 AL137067.2-201ENST00000621202 131 ntBASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 AL357562.1-201ENST00000624911 609 ntBASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 BIN2P1-201ENST00000504996 1530 ntBASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 DNM1P47-203ENST00000571780 12667 ntBASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAB40ALP0C0E4 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RAB40ALP0C0E4 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
RAB40ALP0C0E4 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RAB40ALP0C0E4 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RAB40ALP0C0E4 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
RAB40ALP0C0E4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RAB40ALP0C0E4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
RAB40ALP0C0E4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AC012254.3-201ENST00000591183 2117 ntBASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AC011815.2-201ENST00000618230 2021 ntBASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 RNU6-1331P-201ENST00000363658 106 ntBASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 RPS3AP2-201ENST00000407190 754 ntBASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 RNA5SP178-201ENST00000410380 128 ntBASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AP006222.1-205ENST00000450734 457 ntBASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 RPS26P24-201ENST00000497656 331 ntBASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AC026616.1-201ENST00000523157 525 ntBASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AC067805.1-201ENST00000559344 470 ntBASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 ZNF322P1-201ENST00000568013 1209 ntBASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 NPM1P45-201ENST00000583151 559 ntBASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AC091305.2-201ENST00000624049 1576 ntBASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 CR382285.2-201ENST00000624662 1495 ntBASIC5.71□□□□□ -1.5
RAB40ALP0C0E4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.7□□□□□ -1.5
RAB40ALP0C0E4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms