Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.36□□□□□ -1.39
VTNP04004 CU639417.4-201ENST00000623928 207 ntBASIC6.36□□□□□ -1.39
VTNP04004 AL390318.1-201ENST00000624564 687 ntBASIC6.36□□□□□ -1.39
VTNP04004 AC027279.4-201ENST00000624371 2072 ntBASIC6.36□□□□□ -1.39
VTNP04004 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
VTNP04004 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VTNP04004 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VTNP04004 AC011504.1-201ENST00000623331 4103 ntBASIC6.36□□□□□ -1.39
VTNP04004 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
VTNP04004 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
VTNP04004 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VTNP04004 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.36□□□□□ -1.39
VTNP04004 YES1P1-201ENST00000418510 1628 ntBASIC6.36□□□□□ -1.39
VTNP04004 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VTNP04004 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VTNP04004 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
VTNP04004 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.35□□□□□ -1.39
VTNP04004 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.35□□□□□ -1.39
VTNP04004 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VTNP04004 AC114786.1-201ENST00000512892 1415 ntBASIC6.35□□□□□ -1.39
VTNP04004 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
VTNP04004 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.35□□□□□ -1.39
VTNP04004 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VTNP04004 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VTNP04004 RNA5SP132-201ENST00000364725 118 ntBASIC6.35□□□□□ -1.39
VTNP04004 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.35□□□□□ -1.39
VTNP04004 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.35□□□□□ -1.39
VTNP04004 AC019205.1-201ENST00000421830 730 ntBASIC6.35□□□□□ -1.39
VTNP04004 TNPO1P1-201ENST00000423641 1138 ntBASIC6.35□□□□□ -1.39
VTNP04004 OR5W1P-201ENST00000423705 938 ntBASIC6.35□□□□□ -1.39
VTNP04004 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.35□□□□□ -1.39
VTNP04004 CYCSP51-201ENST00000443545 318 ntBASIC6.35□□□□□ -1.39
VTNP04004 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.35□□□□□ -1.39
VTNP04004 AL445687.2-201ENST00000458156 728 ntBASIC6.35□□□□□ -1.39
VTNP04004 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.35□□□□□ -1.39
VTNP04004 RPS4XP14-201ENST00000493072 781 ntBASIC6.35□□□□□ -1.39
VTNP04004 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VTNP04004 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.35□□□□□ -1.39
VTNP04004 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.35□□□□□ -1.39
VTNP04004 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.35□□□□□ -1.39
VTNP04004 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.35□□□□□ -1.39
VTNP04004 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.35□□□□□ -1.39
VTNP04004 AC007225.2-201ENST00000562529 256 ntBASIC6.35□□□□□ -1.39
VTNP04004 AC007448.1-201ENST00000582714 234 ntBASIC6.35□□□□□ -1.39
VTNP04004 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.35□□□□□ -1.39
VTNP04004 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.35□□□□□ -1.39
VTNP04004 AC063977.5-201ENST00000601044 974 ntBASIC6.35□□□□□ -1.39
VTNP04004 AP000864.1-201ENST00000609424 650 ntBASIC6.35□□□□□ -1.39
VTNP04004 AL355974.3-201ENST00000617383 467 ntBASIC6.35□□□□□ -1.39
VTNP04004 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VTNP04004 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VTNP04004 LINC02019-201ENST00000608605 2060 ntBASIC6.35□□□□□ -1.39
VTNP04004 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VTNP04004 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.35□□□□□ -1.39
VTNP04004 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.35□□□□□ -1.39
VTNP04004 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
VTNP04004 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VTNP04004 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VTNP04004 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
VTNP04004 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VTNP04004 NR1H5P-201ENST00000452683 1377 ntBASIC6.34□□□□□ -1.39
VTNP04004 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VTNP04004 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VTNP04004 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.34□□□□□ -1.39
VTNP04004 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VTNP04004 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VTNP04004 RN7SKP160-201ENST00000363804 340 ntBASIC6.34□□□□□ -1.39
VTNP04004 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.34□□□□□ -1.39
VTNP04004 SNORA70H-201ENST00000383910 135 ntBASIC6.34□□□□□ -1.39
VTNP04004 SNORA70J-201ENST00000384182 135 ntBASIC6.34□□□□□ -1.39
VTNP04004 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.34□□□□□ -1.39
VTNP04004 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.34□□□□□ -1.39
VTNP04004 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.34□□□□□ -1.39
VTNP04004 MARK2P12-201ENST00000420129 585 ntBASIC6.34□□□□□ -1.39
VTNP04004 BX510359.3-201ENST00000422168 306 ntBASIC6.34□□□□□ -1.39
VTNP04004 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.34□□□□□ -1.39
VTNP04004 AC012075.1-201ENST00000436549 580 ntBASIC6.34□□□□□ -1.39
VTNP04004 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.34□□□□□ -1.39
VTNP04004 NPM1P19-201ENST00000450070 712 ntBASIC6.34□□□□□ -1.39
VTNP04004 RNU1-88P-201ENST00000459274 128 ntBASIC6.34□□□□□ -1.39
VTNP04004 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VTNP04004 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.34□□□□□ -1.39
VTNP04004 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.34□□□□□ -1.39
VTNP04004 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.34□□□□□ -1.39
VTNP04004 AC027026.1-201ENST00000532323 742 ntBASIC6.34□□□□□ -1.39
VTNP04004 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.34□□□□□ -1.39
VTNP04004 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.34□□□□□ -1.39
VTNP04004 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.34□□□□□ -1.39
VTNP04004 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.34□□□□□ -1.39
VTNP04004 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VTNP04004 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.34□□□□□ -1.39
VTNP04004 MIR1273E-201ENST00000581165 102 ntBASIC6.34□□□□□ -1.39
VTNP04004 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.34□□□□□ -1.39
VTNP04004 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
VTNP04004 AC022164.1-201ENST00000568767 2673 ntBASIC6.34□□□□□ -1.39
VTNP04004 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
VTNP04004 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
VTNP04004 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
VTNP04004 AC007998.4-201ENST00000612496 2533 ntBASIC6.34□□□□□ -1.39
VTNP04004 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.34□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms