Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.42□□□□□ -1.38
CHRNA1P02708 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.42□□□□□ -1.38
CHRNA1P02708 MIR1273E-201ENST00000581165 102 ntBASIC6.42□□□□□ -1.38
CHRNA1P02708 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.42□□□□□ -1.38
CHRNA1P02708 SDR42E1P1-201ENST00000611327 477 ntBASIC6.42□□□□□ -1.38
CHRNA1P02708 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.42□□□□□ -1.38
CHRNA1P02708 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.42□□□□□ -1.38
CHRNA1P02708 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHRNA1P02708 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CHRNA1P02708 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
CHRNA1P02708 MRE11P1-201ENST00000464884 2127 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHRNA1P02708 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CHRNA1P02708 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHRNA1P02708 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.41□□□□□ -1.38
CHRNA1P02708 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHRNA1P02708 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHRNA1P02708 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHRNA1P02708 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.41□□□□□ -1.38
CHRNA1P02708 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CHRNA1P02708 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CHRNA1P02708 OR9K1P-201ENST00000326513 941 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 RN7SKP151-201ENST00000410230 316 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 AL355433.1-201ENST00000422804 300 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.41□□□□□ -1.38
CHRNA1P02708 DEFA9P-201ENST00000433042 285 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 AC012075.1-201ENST00000436549 580 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 AL590399.4-201ENST00000436561 601 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 AL163193.1-201ENST00000444895 788 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHRNA1P02708 AC026348.1-201ENST00000462549 1053 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 SIAH1P1-201ENST00000479411 923 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 RN7SL184P-201ENST00000488308 297 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 AC009120.1-201ENST00000493458 473 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 AC108693.1-201ENST00000496068 432 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.41□□□□□ -1.38
CHRNA1P02708 MRPS16P1-201ENST00000523462 412 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.41□□□□□ -1.38
CHRNA1P02708 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.41□□□□□ -1.38
CHRNA1P02708 OR4A42P-201ENST00000531397 938 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 IGBP1P1-201ENST00000554337 1009 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.41□□□□□ -1.38
CHRNA1P02708 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.41□□□□□ -1.38
CHRNA1P02708 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
CHRNA1P02708 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.41□□□□□ -1.38
CHRNA1P02708 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.41□□□□□ -1.38
CHRNA1P02708 AC008115.3-201ENST00000614874 549 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHRNA1P02708 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.41□□□□□ -1.38
CHRNA1P02708 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.41□□□□□ -1.38
CHRNA1P02708 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHRNA1P02708 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CHRNA1P02708 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHRNA1P02708 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.41□□□□□ -1.38
CHRNA1P02708 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CHRNA1P02708 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CHRNA1P02708 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.41□□□□□ -1.38
CHRNA1P02708 SRRM1P3-201ENST00000426911 2678 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHRNA1P02708 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.41□□□□□ -1.38
CHRNA1P02708 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHRNA1P02708 AC120036.2-201ENST00000509729 1474 ntBASIC6.41□□□□□ -1.38
CHRNA1P02708 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHRNA1P02708 AL132656.3-201ENST00000606384 1595 ntBASIC6.4□□□□□ -1.38
CHRNA1P02708 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CHRNA1P02708 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.4□□□□□ -1.38
CHRNA1P02708 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.4□□□□□ -1.38
CHRNA1P02708 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHRNA1P02708 DOCK11P1-201ENST00000553480 5932 ntBASIC6.4□□□□□ -1.38
CHRNA1P02708 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.4□□□□□ -1.38
CHRNA1P02708 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHRNA1P02708 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.4□□□□□ -1.38
CHRNA1P02708 NPM1P4-201ENST00000414095 812 ntBASIC6.4□□□□□ -1.38
CHRNA1P02708 AC017078.1-201ENST00000416146 368 ntBASIC6.4□□□□□ -1.38
CHRNA1P02708 FMO7P-201ENST00000436045 768 ntBASIC6.4□□□□□ -1.38
CHRNA1P02708 AL663074.2-201ENST00000440621 479 ntBASIC6.4□□□□□ -1.38
CHRNA1P02708 RPL17P2-201ENST00000491913 451 ntBASIC6.4□□□□□ -1.38
CHRNA1P02708 OR7E157P-201ENST00000494376 911 ntBASIC6.4□□□□□ -1.38
CHRNA1P02708 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.4□□□□□ -1.38
CHRNA1P02708 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.4□□□□□ -1.38
CHRNA1P02708 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CHRNA1P02708 AL049872.1-201ENST00000556323 322 ntBASIC6.4□□□□□ -1.38
CHRNA1P02708 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CHRNA1P02708 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.4□□□□□ -1.38
CHRNA1P02708 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.4□□□□□ -1.38
CHRNA1P02708 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.4□□□□□ -1.38
CHRNA1P02708 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.4□□□□□ -1.38
CHRNA1P02708 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.4□□□□□ -1.38
CHRNA1P02708 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.4□□□□□ -1.38
CHRNA1P02708 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.4□□□□□ -1.38
CHRNA1P02708 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHRNA1P02708 AC140479.2-201ENST00000421567 3130 ntBASIC6.4□□□□□ -1.39
CHRNA1P02708 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CHRNA1P02708 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CHRNA1P02708 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.4□□□□□ -1.39
CHRNA1P02708 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CHRNA1P02708 YES1P1-201ENST00000418510 1628 ntBASIC6.39□□□□□ -1.39
CHRNA1P02708 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHRNA1P02708 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.39□□□□□ -1.39
CHRNA1P02708 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms