Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZIC3O60481 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
ZIC3O60481 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.47□□□□□ -1.53
ZIC3O60481 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.47□□□□□ -1.53
ZIC3O60481 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.47□□□□□ -1.53
ZIC3O60481 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.47□□□□□ -1.53
ZIC3O60481 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZIC3O60481 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
ZIC3O60481 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ZIC3O60481 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.47□□□□□ -1.53
ZIC3O60481 LCN1P2-201ENST00000372030 223 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.47□□□□□ -1.53
ZIC3O60481 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.47□□□□□ -1.53
ZIC3O60481 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZIC3O60481 AC019205.1-201ENST00000421830 730 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 ELOCP6-201ENST00000429066 328 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
ZIC3O60481 GAPDHP75-201ENST00000433910 943 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZIC3O60481 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
ZIC3O60481 AL445466.1-201ENST00000448432 357 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZIC3O60481 ELOCP12-201ENST00000458706 328 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.47□□□□□ -1.53
ZIC3O60481 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.47□□□□□ -1.53
ZIC3O60481 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.47□□□□□ -1.53
ZIC3O60481 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
ZIC3O60481 PCNAP1-201ENST00000505363 709 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 AC025458.1-201ENST00000506046 166 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.47□□□□□ -1.53
ZIC3O60481 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.47□□□□□ -1.53
ZIC3O60481 TRIM77BP-201ENST00000524985 1119 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.47□□□□□ -1.53
ZIC3O60481 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ZIC3O60481 MTND5P21-201ENST00000531961 522 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.47□□□□□ -1.53
ZIC3O60481 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.47□□□□□ -1.53
ZIC3O60481 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.47□□□□□ -1.53
ZIC3O60481 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZIC3O60481 AC090651.1-201ENST00000567865 634 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ZIC3O60481 AC126365.2-201ENST00000580630 379 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 AC005244.1-201ENST00000582566 339 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.47□□□□□ -1.53
ZIC3O60481 BNIP3P27-201ENST00000599991 412 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 AL138895.2-201ENST00000603019 178 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 AC108865.2-201ENST00000606881 432 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.47□□□□□ -1.53
ZIC3O60481 AL136097.3-201ENST00000611097 505 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 MIR6809-201ENST00000612189 116 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 AC022306.3-201ENST00000619930 550 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.47□□□□□ -1.53
ZIC3O60481 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ZIC3O60481 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.47□□□□□ -1.53
ZIC3O60481 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.47□□□□□ -1.53
ZIC3O60481 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
ZIC3O60481 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ZIC3O60481 AC016583.1-201ENST00000624221 2431 ntBASIC5.47□□□□□ -1.53
ZIC3O60481 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.47□□□□□ -1.53
ZIC3O60481 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
ZIC3O60481 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.47□□□□□ -1.53
ZIC3O60481 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZIC3O60481 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.47□□□□□ -1.53
ZIC3O60481 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
ZIC3O60481 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ZIC3O60481 GNL2P1-201ENST00000451274 2190 ntBASIC5.46□□□□□ -1.53
ZIC3O60481 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.46□□□□□ -1.53
ZIC3O60481 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
ZIC3O60481 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ZIC3O60481 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
ZIC3O60481 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ZIC3O60481 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.46□□□□□ -1.53
ZIC3O60481 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.46□□□□□ -1.54
ZIC3O60481 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZIC3O60481 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.46□□□□□ -1.54
ZIC3O60481 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.46□□□□□ -1.54
ZIC3O60481 MIR421-201ENST00000365696 85 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZIC3O60481 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.46□□□□□ -1.54
ZIC3O60481 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.46□□□□□ -1.54
ZIC3O60481 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZIC3O60481 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.46□□□□□ -1.54
ZIC3O60481 MTCO1P45-201ENST00000431457 267 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 AK3P5-201ENST00000432033 519 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.46□□□□□ -1.54
ZIC3O60481 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.46□□□□□ -1.54
ZIC3O60481 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZIC3O60481 RPL7L1P3-201ENST00000455249 689 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.46□□□□□ -1.54
ZIC3O60481 RN7SL269P-201ENST00000467795 305 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 NDUFA5P5-201ENST00000468361 342 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.46□□□□□ -1.54
ZIC3O60481 RPL23AP40-201ENST00000487630 390 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 AC083795.1-201ENST00000491760 320 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.46□□□□□ -1.54
ZIC3O60481 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.46□□□□□ -1.54
ZIC3O60481 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 AP003396.4-201ENST00000527574 265 ntBASIC5.46□□□□□ -1.54
ZIC3O60481 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.46□□□□□ -1.54
ZIC3O60481 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms