Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 U3.25-201ENST00000391209 220 ntBASIC7.43□□□□□ -1.22
SOX1O00570 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.43□□□□□ -1.22
SOX1O00570 XKRYP4-201ENST00000414395 483 ntBASIC7.43□□□□□ -1.22
SOX1O00570 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC7.43□□□□□ -1.22
SOX1O00570 NPM1P11-201ENST00000417106 855 ntBASIC7.43□□□□□ -1.22
SOX1O00570 GEMIN2P2-201ENST00000418195 715 ntBASIC7.43□□□□□ -1.22
SOX1O00570 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.43□□□□□ -1.22
SOX1O00570 AL161636.2-201ENST00000445179 927 ntBASIC7.43□□□□□ -1.22
SOX1O00570 CDC27P1-201ENST00000445384 715 ntBASIC7.43□□□□□ -1.22
SOX1O00570 AL590004.3-202ENST00000445883 451 ntBASIC7.43□□□□□ -1.22
SOX1O00570 XKRYP5-201ENST00000449659 483 ntBASIC7.43□□□□□ -1.22
SOX1O00570 SUMO2P2-201ENST00000456482 255 ntBASIC7.43□□□□□ -1.22
SOX1O00570 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX1O00570 ARL4AP1-201ENST00000503220 705 ntBASIC7.43□□□□□ -1.22
SOX1O00570 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SOX1O00570 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.43□□□□□ -1.22
SOX1O00570 RN7SKP35-201ENST00000517210 151 ntBASIC7.43□□□□□ -1.22
SOX1O00570 HIGD1AP18-201ENST00000520730 278 ntBASIC7.43□□□□□ -1.22
SOX1O00570 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.43□□□□□ -1.22
SOX1O00570 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX1O00570 AP000873.5-201ENST00000533906 236 ntBASIC7.43□□□□□ -1.22
SOX1O00570 OR11H3P-201ENST00000554547 982 ntBASIC7.43□□□□□ -1.22
SOX1O00570 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX1O00570 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC7.43□□□□□ -1.22
SOX1O00570 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 AC012417.1-201ENST00000582307 1039 ntBASIC7.43□□□□□ -1.22
SOX1O00570 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX1O00570 AC010323.2-201ENST00000596405 594 ntBASIC7.43□□□□□ -1.22
SOX1O00570 AL606834.2-201ENST00000602954 668 ntBASIC7.43□□□□□ -1.22
SOX1O00570 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.43□□□□□ -1.22
SOX1O00570 AC211433.2-201ENST00000608433 387 ntBASIC7.43□□□□□ -1.22
SOX1O00570 AC004223.4-201ENST00000612426 332 ntBASIC7.43□□□□□ -1.22
SOX1O00570 AL359513.1-201ENST00000614364 557 ntBASIC7.43□□□□□ -1.22
SOX1O00570 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC7.43□□□□□ -1.22
SOX1O00570 AC126175.1-201ENST00000617041 758 ntBASIC7.43□□□□□ -1.22
SOX1O00570 AC024884.1-201ENST00000620583 399 ntBASIC7.43□□□□□ -1.22
SOX1O00570 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.43□□□□□ -1.22
SOX1O00570 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC7.43□□□□□ -1.22
SOX1O00570 SLC10A5P1-201ENST00000379063 1306 ntBASIC7.43□□□□□ -1.22
SOX1O00570 AL590065.1-201ENST00000603371 4774 ntBASIC7.43□□□□□ -1.22
SOX1O00570 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.43□□□□□ -1.22
SOX1O00570 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SOX1O00570 NXF4-202ENST00000416098 1465 ntBASIC7.43□□□□□ -1.22
SOX1O00570 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.43□□□□□ -1.22
SOX1O00570 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC7.42□□□□□ -1.22
SOX1O00570 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.42□□□□□ -1.22
SOX1O00570 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC7.42□□□□□ -1.22
SOX1O00570 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC7.42□□□□□ -1.22
SOX1O00570 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SOX1O00570 AC003045.1-201ENST00000398779 713 ntBASIC7.42□□□□□ -1.22
SOX1O00570 RPS3AP24-201ENST00000407896 734 ntBASIC7.42□□□□□ -1.22
SOX1O00570 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SOX1O00570 USP9YP33-201ENST00000412220 421 ntBASIC7.42□□□□□ -1.22
SOX1O00570 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.42□□□□□ -1.22
SOX1O00570 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC7.42□□□□□ -1.22
SOX1O00570 MOB1AP1-201ENST00000430903 535 ntBASIC7.42□□□□□ -1.22
SOX1O00570 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.42□□□□□ -1.22
SOX1O00570 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC7.42□□□□□ -1.22
SOX1O00570 HSD52-202ENST00000436225 772 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX1O00570 RBMX2P4-201ENST00000441256 376 ntBASIC7.42□□□□□ -1.22
SOX1O00570 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.42□□□□□ -1.22
SOX1O00570 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.42□□□□□ -1.22
SOX1O00570 OR52I1-201ENST00000450052 1050 ntBASIC7.42□□□□□ -1.22
SOX1O00570 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX1O00570 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.42□□□□□ -1.22
SOX1O00570 CST12P-201ENST00000457644 362 ntBASIC7.42□□□□□ -1.22
SOX1O00570 AC009963.3-201ENST00000458090 486 ntBASIC7.42□□□□□ -1.22
SOX1O00570 AC013787.1-201ENST00000460165 307 ntBASIC7.42□□□□□ -1.22
SOX1O00570 AC090058.1-201ENST00000498788 435 ntBASIC7.42□□□□□ -1.22
SOX1O00570 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX1O00570 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC7.42□□□□□ -1.22
SOX1O00570 AC010285.3-201ENST00000511668 676 ntBASIC7.42□□□□□ -1.22
SOX1O00570 AC091965.2-201ENST00000512324 613 ntBASIC7.42□□□□□ -1.22
SOX1O00570 RNA5SP318-201ENST00000516352 92 ntBASIC7.42□□□□□ -1.22
SOX1O00570 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX1O00570 IGLVV-66-201ENST00000523818 341 ntBASIC7.42□□□□□ -1.22
SOX1O00570 HIGD1AP10-201ENST00000527837 282 ntBASIC7.42□□□□□ -1.22
SOX1O00570 AHI1-217ENST00000534469 680 ntTSL 3 BASIC7.42□□□□□ -1.22
SOX1O00570 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms