Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SDCBPO00560 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SDCBPO00560 MIR133A2-201ENST00000347538 102 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SDCBPO00560 RN7SKP279-201ENST00000411383 298 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.89□□□□□ -1.63
SDCBPO00560 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.89□□□□□ -1.63
SDCBPO00560 RPSAP65-201ENST00000429660 595 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.89□□□□□ -1.63
SDCBPO00560 MED28P3-201ENST00000444288 531 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.89□□□□□ -1.63
SDCBPO00560 AC023271.1-201ENST00000445936 1090 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.89□□□□□ -1.63
SDCBPO00560 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SDCBPO00560 GAPDHP62-201ENST00000515313 990 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.89□□□□□ -1.63
SDCBPO00560 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.89□□□□□ -1.63
SDCBPO00560 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.89□□□□□ -1.63
SDCBPO00560 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.89□□□□□ -1.63
SDCBPO00560 AC092332.1-201ENST00000563684 829 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.89□□□□□ -1.63
SDCBPO00560 GARSP1-201ENST00000570895 719 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.89□□□□□ -1.63
SDCBPO00560 MIR4502-201ENST00000580432 81 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.89□□□□□ -1.63
SDCBPO00560 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.89□□□□□ -1.63
SDCBPO00560 HIRAP1-201ENST00000605318 787 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.89□□□□□ -1.63
SDCBPO00560 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.89□□□□□ -1.63
SDCBPO00560 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SDCBPO00560 AC004801.6-201ENST00000616571 978 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 AC009120.7-201ENST00000623452 780 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 CASC19-274ENST00000642018 970 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SDCBPO00560 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SDCBPO00560 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.89□□□□□ -1.63
SDCBPO00560 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.89□□□□□ -1.63
SDCBPO00560 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.89□□□□□ -1.63
SDCBPO00560 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SDCBPO00560 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.89□□□□□ -1.63
SDCBPO00560 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.89□□□□□ -1.63
SDCBPO00560 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
SDCBPO00560 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SDCBPO00560 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SDCBPO00560 AC008627.1-201ENST00000517511 1704 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 RBPJP7-201ENST00000442803 1447 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 RBPJP5-201ENST00000449433 1447 ntBASIC4.89□□□□□ -1.63
SDCBPO00560 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
SDCBPO00560 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.88□□□□□ -1.63
SDCBPO00560 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.88□□□□□ -1.63
SDCBPO00560 RPS27AP6-201ENST00000427962 448 ntBASIC4.88□□□□□ -1.63
SDCBPO00560 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.88□□□□□ -1.63
SDCBPO00560 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.88□□□□□ -1.63
SDCBPO00560 AL445928.1-201ENST00000435545 222 ntBASIC4.88□□□□□ -1.63
SDCBPO00560 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.88□□□□□ -1.63
SDCBPO00560 TIMM8BP2-201ENST00000445940 251 ntBASIC4.88□□□□□ -1.63
SDCBPO00560 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 AC009963.3-201ENST00000458090 486 ntBASIC4.88□□□□□ -1.63
SDCBPO00560 AC023245.1-201ENST00000468501 517 ntBASIC4.88□□□□□ -1.63
SDCBPO00560 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.88□□□□□ -1.63
SDCBPO00560 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.88□□□□□ -1.63
SDCBPO00560 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.88□□□□□ -1.63
SDCBPO00560 AC021146.10-201ENST00000515628 706 ntBASIC4.88□□□□□ -1.63
SDCBPO00560 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.88□□□□□ -1.63
SDCBPO00560 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.88□□□□□ -1.63
SDCBPO00560 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SDCBPO00560 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.88□□□□□ -1.63
SDCBPO00560 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.88□□□□□ -1.63
SDCBPO00560 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.88□□□□□ -1.63
SDCBPO00560 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.88□□□□□ -1.63
SDCBPO00560 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.88□□□□□ -1.63
SDCBPO00560 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.88□□□□□ -1.63
SDCBPO00560 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.88□□□□□ -1.63
SDCBPO00560 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.88□□□□□ -1.63
SDCBPO00560 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.88□□□□□ -1.63
SDCBPO00560 TXNP4-201ENST00000575018 310 ntBASIC4.88□□□□□ -1.63
SDCBPO00560 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.88□□□□□ -1.63
SDCBPO00560 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.88□□□□□ -1.63
SDCBPO00560 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.88□□□□□ -1.63
SDCBPO00560 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.88□□□□□ -1.63
SDCBPO00560 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SDCBPO00560 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SDCBPO00560 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms