Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC010998.3-201ENST00000613871 631 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC073862.4-201ENST00000622982 854 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 ZNF101P1-201ENST00000435701 1720 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AC105749.1-201ENST00000631338 2008 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 RNU1-134P-201ENST00000362935 165 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 CBX1P3-201ENST00000413296 527 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 IPPKP1-201ENST00000422501 768 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 Z85994.2-201ENST00000434327 452 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AL353662.1-201ENST00000439099 327 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 MORF4-201ENST00000447135 971 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 EIF2S2P4-201ENST00000461070 984 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 GTF2IP9-201ENST00000502460 301 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AC090958.1-201ENST00000511122 351 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 RN7SKP238-201ENST00000516483 249 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 Y_RNA.710-201ENST00000516975 110 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AP004609.2-201ENST00000532177 190 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 MIR4701-201ENST00000583094 63 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 ABI1P1-201ENST00000603375 1120 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AL356608.1-201ENST00000610034 820 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AL512652.1-201ENST00000619006 500 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AL109659.3-201ENST00000624985 950 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 NEK2P2-201ENST00000438441 1338 ntBASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.24□□□□□ -1.25
CTDP1Q9Y5B0 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AC093909.5-201ENST00000621839 1799 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AC034229.2-201ENST00000566945 2508 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AC105235.1-201ENST00000623208 1816 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 FUNDC2P3-201ENST00000334716 533 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 MIR323B-201ENST00000385269 82 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AC092642.1-201ENST00000392417 425 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AL132875.1-201ENST00000403623 949 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 RPS3AP25-201ENST00000411660 793 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 HMGN1P20-201ENST00000411849 300 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AC011242.1-201ENST00000433596 1158 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 ZNF736P8Y-201ENST00000451913 669 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AC002553.3-201ENST00000453002 341 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 ACA64.1-201ENST00000459171 127 ntBASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.23□□□□□ -1.25
CTDP1Q9Y5B0 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms