Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 SELENOWP1-201ENST00000322792 252 ntBASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AL096711.1-201ENST00000404780 554 ntBASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 KIF4CP-201ENST00000422742 1279 ntBASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC104843.2-201ENST00000427666 297 ntBASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AL445928.1-201ENST00000435545 222 ntBASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 GEMIN2P1-201ENST00000454246 752 ntBASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC090058.1-201ENST00000498788 435 ntBASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 RN7SKP288-201ENST00000516227 268 ntBASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC090826.1-203ENST00000569235 490 ntBASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 OOSP1P2-201ENST00000579644 351 ntBASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC108673.3-201ENST00000609183 335 ntBASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 MIR6809-201ENST00000612189 116 ntBASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AL445670.1-201ENST00000618889 801 ntBASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC016542.2-201ENST00000624201 619 ntBASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 AC130304.1-201ENST00000622942 2385 ntBASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 AL137141.1-201ENST00000624622 4836 ntBASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 AC022164.1-201ENST00000568767 2673 ntBASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 AC005261.2-201ENST00000593427 4258 ntBASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 AC016739.1-201ENST00000405359 345 ntBASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 AL512422.1-201ENST00000407033 553 ntBASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 IPPKP1-201ENST00000422501 768 ntBASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 AL603882.1-201ENST00000463059 681 ntBASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 PFN1P6-201ENST00000476786 399 ntBASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 RN7SL101P-201ENST00000496350 279 ntBASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 SCARNA18.1-201ENST00000516330 83 ntBASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 RNA5SP340-201ENST00000517132 107 ntBASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 NANOGNBP2-201ENST00000544753 553 ntBASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 AC007346.2-201ENST00000564816 892 ntBASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 MIR3614-201ENST00000581261 86 ntBASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 AC008521.2-201ENST00000591021 259 ntBASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 AL021918.2-201ENST00000613415 194 ntBASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7.09□□□□□ -1.27
CTNNA3Q9UI47 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.09□□□□□ -1.28
CTNNA3Q9UI47 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
CTNNA3Q9UI47 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC7.08□□□□□ -1.28
CTNNA3Q9UI47 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.08□□□□□ -1.28
CTNNA3Q9UI47 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.08□□□□□ -1.28
CTNNA3Q9UI47 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTNNA3Q9UI47 AC099654.3-201ENST00000447087 1546 ntBASIC7.08□□□□□ -1.28
CTNNA3Q9UI47 RNFT1P3-201ENST00000340898 1052 ntBASIC7.08□□□□□ -1.28
CTNNA3Q9UI47 RN7SKP77-201ENST00000363261 353 ntBASIC7.08□□□□□ -1.28
CTNNA3Q9UI47 RN7SKP128-201ENST00000364270 303 ntBASIC7.08□□□□□ -1.28
CTNNA3Q9UI47 RN7SKP81-201ENST00000365603 331 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms