Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 AC008957.3-201ENST00000624112 2242 ntBASIC6.81□□□□□ -1.32
COL20A1Q9P218 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL20A1Q9P218 AC015689.2-201ENST00000528172 1738 ntBASIC6.81□□□□□ -1.32
COL20A1Q9P218 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL20A1Q9P218 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL20A1Q9P218 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
COL20A1Q9P218 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL20A1Q9P218 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL20A1Q9P218 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL20A1Q9P218 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL20A1Q9P218 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 AL121768.1-201ENST00000613917 2544 ntBASIC6.8□□□□□ -1.32
COL20A1Q9P218 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL20A1Q9P218 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL20A1Q9P218 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL20A1Q9P218 RN7SKP128-201ENST00000364270 303 ntBASIC6.8□□□□□ -1.32
COL20A1Q9P218 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 RN7SKP206-201ENST00000410823 293 ntBASIC6.8□□□□□ -1.32
COL20A1Q9P218 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 MRPS33P4-201ENST00000434892 317 ntBASIC6.8□□□□□ -1.32
COL20A1Q9P218 AL445928.1-201ENST00000435545 222 ntBASIC6.8□□□□□ -1.32
COL20A1Q9P218 RPS12P17-201ENST00000438591 377 ntBASIC6.8□□□□□ -1.32
COL20A1Q9P218 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 AC093166.4-201ENST00000457867 318 ntBASIC6.8□□□□□ -1.32
COL20A1Q9P218 AC104164.1-201ENST00000460282 590 ntBASIC6.8□□□□□ -1.32
COL20A1Q9P218 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 AC083795.1-201ENST00000491760 320 ntBASIC6.8□□□□□ -1.32
COL20A1Q9P218 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL20A1Q9P218 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.8□□□□□ -1.32
COL20A1Q9P218 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 AC010547.7-201ENST00000570323 333 ntBASIC6.8□□□□□ -1.32
COL20A1Q9P218 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 AC084824.5-201ENST00000612009 413 ntBASIC6.8□□□□□ -1.32
COL20A1Q9P218 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 OR8G3P-202ENST00000641572 1255 ntBASIC6.8□□□□□ -1.32
COL20A1Q9P218 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL20A1Q9P218 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 OLMALINC-203ENST00000641087 3779 ntBASIC6.8□□□□□ -1.32
COL20A1Q9P218 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL20A1Q9P218 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL20A1Q9P218 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL20A1Q9P218 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL20A1Q9P218 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL20A1Q9P218 AL137918.1-201ENST00000624542 1922 ntBASIC6.8□□□□□ -1.32
COL20A1Q9P218 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
COL20A1Q9P218 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 AC011504.1-201ENST00000623331 4103 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 AL929601.4-201ENST00000613011 1341 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL20A1Q9P218 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL20A1Q9P218 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL20A1Q9P218 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL20A1Q9P218 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL20A1Q9P218 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 TMA16P2-201ENST00000413187 601 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 AP000281.1-201ENST00000444036 316 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 RPL36AP39-201ENST00000445859 318 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 HMGN1P36-201ENST00000446623 298 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 NXT1P1-201ENST00000458481 316 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 RN7SL174P-201ENST00000475578 289 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 NPM1P28-201ENST00000492269 840 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 AC106806.2-201ENST00000509365 500 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 AC005000.1-201ENST00000536192 288 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 AC007494.1-201ENST00000562293 760 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 AL512506.1-201ENST00000613918 449 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 AC126175.1-201ENST00000617041 758 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL20A1Q9P218 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms