Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC117503.3-201ENST00000623811 601 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 MTCO1P15-201ENST00000529569 1526 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AP000473.2-201ENST00000602659 1537 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 OR10R3P-201ENST00000361688 942 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 RN7SKP145-201ENST00000363291 303 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 RNU105B-201ENST00000364478 208 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 RNU6-729P-201ENST00000384399 107 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 RPS15AP30-201ENST00000420976 390 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 NMD3P2-201ENST00000421815 761 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 GPN3P1-201ENST00000423883 535 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 SLC25A24P1-202ENST00000434803 1220 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC242426.1-201ENST00000435270 960 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 GAPDHP37-201ENST00000442317 968 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AL512593.1-201ENST00000444758 779 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 HIGD1AP16-201ENST00000450986 258 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AL133351.3-201ENST00000454998 193 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AL603882.1-201ENST00000463059 681 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 NPM1P28-201ENST00000492269 840 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 RN7SKP34-201ENST00000516142 244 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 CYCSP25-201ENST00000525280 316 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC130364.2-201ENST00000528639 604 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 OR9G2P-201ENST00000533326 880 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AL121594.2-201ENST00000541658 472 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC126615.2-201ENST00000553003 515 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 CHEK2P2-201ENST00000554701 672 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC026898.1-201ENST00000586404 571 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC119403.2-201ENST00000590960 598 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AL137246.1-201ENST00000607072 977 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 uc_338.26-201ENST00000612659 160 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC027506.1-201ENST00000621395 198 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC022400.9-201ENST00000623633 273 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC011933.2-201ENST00000578539 2790 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 FANCD2P2-201ENST00000437591 1400 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 AC015689.2-201ENST00000528172 1738 ntBASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
SND1-IT1Q9HBX3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms