Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 EEF1GP6-201ENST00000402309 905 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 MORF4L1P6-201ENST00000418771 268 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AC005345.1-201ENST00000431868 217 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AL365220.1-201ENST00000432923 399 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 YWHAZP7-201ENST00000436906 631 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AC092393.1-201ENST00000439625 742 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 BX005266.3-201ENST00000443013 1075 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 BX323845.2-201ENST00000458382 234 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AL161747.1-201ENST00000480068 358 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 MTND1P22-201ENST00000510572 951 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AC010285.3-201ENST00000511668 676 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 RNA5SP518-201ENST00000515957 119 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 MIR4470-201ENST00000583453 72 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AL031601.1-201ENST00000605702 394 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AC122710.3-201ENST00000606566 541 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 MIR8089-201ENST00000620165 82 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 MIR4278-201ENST00000636094 69 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AC016251.2-201ENST00000623393 3089 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 BIN2P1-201ENST00000504996 1530 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AC102941.1-201ENST00000567616 1537 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 SGO1P2-201ENST00000429458 1589 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 SAMMSON-222ENST00000641901 2727 ntBASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
TRAIPQ9BWF2 AC011008.2-201ENST00000624866 3352 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AC009784.1-201ENST00000426484 460 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AL390023.1-201ENST00000428836 262 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 SEPT7P5-201ENST00000434048 306 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AC073476.1-201ENST00000452854 407 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AC079193.1-201ENST00000460497 588 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 PABPC1P10-201ENST00000464731 381 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 RPL19P11-201ENST00000495944 589 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AC008837.2-201ENST00000513076 418 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 TCP11X3P-202ENST00000514289 1254 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 IGLVI-42-201ENST00000522485 381 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 PHBP2-201ENST00000532859 806 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 MIR4800-201ENST00000537353 80 ntBASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRAIPQ9BWF2 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms