Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SSX3Q99909 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSX3Q99909 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSX3Q99909 AL606537.1-201ENST00000607258 2011 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSX3Q99909 RBPJP2-201ENST00000618187 1444 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.24□□□□□ -1.57
SSX3Q99909 LINC01613-201ENST00000561476 2780 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSX3Q99909 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.24□□□□□ -1.57
SSX3Q99909 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SSX3Q99909 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SSX3Q99909 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSX3Q99909 AC107977.1-201ENST00000355745 939 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 RNA5SP232-201ENST00000364144 119 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.24□□□□□ -1.57
SSX3Q99909 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.24□□□□□ -1.57
SSX3Q99909 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SSX3Q99909 RPL5P20-201ENST00000403848 896 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 RN7SKP86-201ENST00000410454 332 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 RN7SKP161-201ENST00000411110 305 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 TMA16P2-201ENST00000413187 601 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 AC244453.4-201ENST00000419150 388 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.24□□□□□ -1.57
SSX3Q99909 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.24□□□□□ -1.57
SSX3Q99909 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSX3Q99909 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.24□□□□□ -1.57
SSX3Q99909 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.24□□□□□ -1.57
SSX3Q99909 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.24□□□□□ -1.57
SSX3Q99909 COX4I1P2-201ENST00000447446 547 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSX3Q99909 OR52E7P-201ENST00000452394 933 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 AC118758.1-202ENST00000454719 225 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 AC092824.1-201ENST00000483524 576 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 AC022415.1-202ENST00000486612 523 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.24□□□□□ -1.57
SSX3Q99909 RPL5P14-201ENST00000494197 878 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SSX3Q99909 AC018645.1-201ENST00000505003 109 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 AC083906.1-201ENST00000509298 406 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.24□□□□□ -1.57
SSX3Q99909 SNORA74.1-201ENST00000516320 180 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.24□□□□□ -1.57
SSX3Q99909 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.24□□□□□ -1.57
SSX3Q99909 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.24□□□□□ -1.57
SSX3Q99909 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSX3Q99909 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.24□□□□□ -1.57
SSX3Q99909 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSX3Q99909 OR52K3P-201ENST00000531655 943 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 AC024405.1-201ENST00000532521 1042 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 AC005000.1-201ENST00000536192 288 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.24□□□□□ -1.57
SSX3Q99909 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.24□□□□□ -1.57
SSX3Q99909 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.24□□□□□ -1.57
SSX3Q99909 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSX3Q99909 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.24□□□□□ -1.57
SSX3Q99909 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.24□□□□□ -1.57
SSX3Q99909 AC007494.1-201ENST00000562293 760 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.24□□□□□ -1.57
SSX3Q99909 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.24□□□□□ -1.57
SSX3Q99909 AC122134.1-201ENST00000565664 1104 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.24□□□□□ -1.57
SSX3Q99909 MIR3154-201ENST00000577829 84 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.24□□□□□ -1.57
SSX3Q99909 MIR7109-201ENST00000613748 65 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSX3Q99909 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSX3Q99909 AL353743.3-201ENST00000442109 1468 ntBASIC5.24□□□□□ -1.57
SSX3Q99909 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
SSX3Q99909 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSX3Q99909 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSX3Q99909 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSX3Q99909 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.24□□□□□ -1.57
SSX3Q99909 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX3Q99909 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SSX3Q99909 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX3Q99909 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX3Q99909 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX3Q99909 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX3Q99909 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX3Q99909 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX3Q99909 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSX3Q99909 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX3Q99909 RNA5SP77-201ENST00000365394 120 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX3Q99909 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX3Q99909 RNU1-46P-201ENST00000384425 164 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 MT-RNR1-201ENST00000389680 954 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX3Q99909 AC003045.1-201ENST00000398779 713 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 OOSP1-201ENST00000398992 1270 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX3Q99909 OR51A6P-201ENST00000418680 1004 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 VN1R20P-201ENST00000425215 966 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 AKR1B10P1-201ENST00000425765 942 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX3Q99909 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX3Q99909 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX3Q99909 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX3Q99909 HMGB3P10-201ENST00000434734 572 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms