Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC127070.3-201ENST00000503695 3263 ntBASIC6.67□□□□□ -1.34
CDK5RAP1Q96SZ6 AC105235.1-201ENST00000623208 1816 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 XKRY2-202ENST00000623874 1581 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 XKRY-202ENST00000624960 1581 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC034229.2-201ENST00000566945 2508 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 RN7SKP237-201ENST00000364663 301 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 RPL24P2-201ENST00000421023 475 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 Z84478.1-201ENST00000438230 1219 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 MTCYBP12-201ENST00000440559 1134 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AL645936.1-201ENST00000441979 518 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 MTND1P29-201ENST00000448112 647 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 snoU109.3-201ENST00000459477 145 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 RN7SL369P-201ENST00000477138 299 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 RPL12P31-201ENST00000478433 450 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC106822.1-201ENST00000502647 526 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AF213884.2-201ENST00000510417 903 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 MTND1P5-201ENST00000517906 940 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC021451.1-201ENST00000523498 1129 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 OR10D4P-201ENST00000525892 951 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 NPIPB14P-203ENST00000532298 987 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 CBX3P7-201ENST00000532876 502 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC009729.1-201ENST00000548873 1133 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC068620.3-201ENST00000602749 560 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC027334.1-201ENST00000603257 310 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC069431.2-201ENST00000604149 1099 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 uc_338.31-201ENST00000615595 186 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC231759.1-201ENST00000616455 597 ntBASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.66□□□□□ -1.34
CDK5RAP1Q96SZ6 AC007114.2-201ENST00000576014 4281 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 RNA5SP232-201ENST00000364144 119 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AL592310.1-201ENST00000414330 671 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AC092865.3-201ENST00000425390 1026 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 MTND1P20-201ENST00000430341 950 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 SOCS5P1-201ENST00000440415 949 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 OR52E7P-201ENST00000452394 933 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 CTSLP6-201ENST00000458273 1002 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 RN7SL254P-201ENST00000460609 284 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AC092824.1-201ENST00000483524 576 ntBASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC6.65□□□□□ -1.34
CDK5RAP1Q96SZ6 AC091874.2-201ENST00000505889 720 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms