Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AL121776.1-201ENST00000429337 372 ntBASIC6.72□□□□□ -1.33
CDK5RAP2Q96SN8 AC245047.2-201ENST00000441060 530 ntBASIC6.72□□□□□ -1.33
CDK5RAP2Q96SN8 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP2Q96SN8 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP2Q96SN8 ATP5LP3-201ENST00000514223 304 ntBASIC6.72□□□□□ -1.33
CDK5RAP2Q96SN8 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP2Q96SN8 AC000068.2-201ENST00000608816 460 ntBASIC6.72□□□□□ -1.33
CDK5RAP2Q96SN8 AL022323.4-201ENST00000623980 13120 ntBASIC6.72□□□□□ -1.33
CDK5RAP2Q96SN8 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.72□□□□□ -1.33
CDK5RAP2Q96SN8 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP2Q96SN8 AL359195.2-201ENST00000623657 4412 ntBASIC6.72□□□□□ -1.33
CDK5RAP2Q96SN8 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP2Q96SN8 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP2Q96SN8 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CDK5RAP2Q96SN8 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP2Q96SN8 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC6.72□□□□□ -1.33
CDK5RAP2Q96SN8 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC6.71□□□□□ -1.33
CDK5RAP2Q96SN8 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
CDK5RAP2Q96SN8 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
CDK5RAP2Q96SN8 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CDK5RAP2Q96SN8 AC073342.2-201ENST00000595842 1800 ntBASIC6.71□□□□□ -1.33
CDK5RAP2Q96SN8 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.71□□□□□ -1.33
CDK5RAP2Q96SN8 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
CDK5RAP2Q96SN8 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
CDK5RAP2Q96SN8 SNORD1C-201ENST00000363315 78 ntBASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 RPL35AP19-201ENST00000469425 329 ntBASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 RNA5SP34-201ENST00000516887 130 ntBASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 AC068870.2-201ENST00000620635 389 ntBASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 AC021766.1-201ENST00000624404 741 ntBASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 AL117378.2-201ENST00000622916 1337 ntBASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 AL662795.2-201ENST00000624252 3706 ntBASIC6.71□□□□□ -1.34
CDK5RAP2Q96SN8 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 RNA5SP339-201ENST00000390987 122 ntBASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 AC092651.1-201ENST00000426110 312 ntBASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 USP24P1-201ENST00000433802 779 ntBASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 AC093270.2-201ENST00000486157 792 ntBASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 DUTP7-201ENST00000507982 486 ntBASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 RNA5SP92-201ENST00000516437 110 ntBASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 AC079414.3-201ENST00000612986 1090 ntBASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 AC093829.1-201ENST00000506662 1618 ntBASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 RPS17P17-201ENST00000419392 409 ntBASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 PRELID3BP3-201ENST00000584963 545 ntBASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 AL139407.1-201ENST00000613826 1175 ntBASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 AL035661.1-201ENST00000620459 1144 ntBASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP2Q96SN8 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP2Q96SN8 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP2Q96SN8 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.69□□□□□ -1.34
CDK5RAP2Q96SN8 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP2Q96SN8 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP2Q96SN8 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CDK5RAP2Q96SN8 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP2Q96SN8 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms