Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 ZNF101P1-201ENST00000435701 1720 ntBASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 RNA5SP388-201ENST00000362584 119 ntBASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 SNORA57.1-201ENST00000391227 145 ntBASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 AL139099.4-201ENST00000614802 114 ntBASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 AC109583.2-201ENST00000617367 129 ntBASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 AC091905.4-201ENST00000623432 202 ntBASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CSMD1Q96PZ7 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 SNORA37-201ENST00000384504 129 ntBASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 CAV1-204ENST00000393470 598 ntTSL 4 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 RPL38P3-201ENST00000484463 213 ntBASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 PARP1P2-201ENST00000556806 195 ntBASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 UBE2FP2-201ENST00000566646 462 ntBASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 AC137695.1-201ENST00000604126 489 ntBASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 ZSCAN29-202ENST00000396976 5595 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 MED28P3-201ENST00000444288 531 ntBASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 RN7SL447P-201ENST00000494711 245 ntBASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CSMD1Q96PZ7 MIR134-201ENST00000385258 73 ntBASIC4.71□□□□□ -1.65
CSMD1Q96PZ7 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.71□□□□□ -1.65
CSMD1Q96PZ7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.71□□□□□ -1.65
CSMD1Q96PZ7 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CSMD1Q96PZ7 TRY2P-201ENST00000448860 689 ntBASIC4.71□□□□□ -1.65
CSMD1Q96PZ7 RPL7P16-201ENST00000479738 738 ntBASIC4.71□□□□□ -1.65
CSMD1Q96PZ7 RN7SKP122-201ENST00000515923 296 ntBASIC4.71□□□□□ -1.65
CSMD1Q96PZ7 AC092490.3-201ENST00000545370 572 ntBASIC4.71□□□□□ -1.65
CSMD1Q96PZ7 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.71□□□□□ -1.65
CSMD1Q96PZ7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.71□□□□□ -1.65
CSMD1Q96PZ7 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.71□□□□□ -1.65
CSMD1Q96PZ7 BNIP3P11-201ENST00000603878 563 ntBASIC4.71□□□□□ -1.65
CSMD1Q96PZ7 AC067931.1-201ENST00000624190 671 ntBASIC4.71□□□□□ -1.65
CSMD1Q96PZ7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.71□□□□□ -1.65
CSMD1Q96PZ7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CSMD1Q96PZ7 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CSMD1Q96PZ7 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 LRRC37A17P-201ENST00000570311 4693 ntBASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 RPS6P23-201ENST00000413224 722 ntBASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 RPL7P11-201ENST00000437586 658 ntBASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 YWHABP1-201ENST00000445359 727 ntBASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 OR7E158P-201ENST00000524483 910 ntBASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 AC126615.2-201ENST00000553003 515 ntBASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.71□□□□□ -1.66
CSMD1Q96PZ7 AC012254.5-201ENST00000623573 478 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms