Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 AL589863.1-201ENST00000595383 631 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC018645.2-201ENST00000609151 472 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC008147.4-201ENST00000617570 1204 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 AL163051.2-201ENST00000618976 735 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC022960.3-201ENST00000619794 441 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 AL591926.1-201ENST00000620542 217 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC004656.1-201ENST00000568479 4951 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC020633.1-201ENST00000468439 2247 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS50Q96JG6 AC015689.2-201ENST00000528172 1738 ntBASIC6.19□□□□□ -1.42
VPS50Q96JG6 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS50Q96JG6 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 LINC01613-201ENST00000561476 2780 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
VPS50Q96JG6 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VPS50Q96JG6 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VPS50Q96JG6 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VPS50Q96JG6 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VPS50Q96JG6 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 SNORA63.3-201ENST00000362682 132 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VPS50Q96JG6 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AL023284.3-201ENST00000407767 334 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 RN7SKP86-201ENST00000410454 332 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 TMA16P2-201ENST00000413187 601 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 LINC00328-2P-201ENST00000436585 219 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VPS50Q96JG6 EEF1B2P3-201ENST00000447718 678 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 CCNJP1-201ENST00000450600 1149 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 RNU6-1102P-201ENST00000516149 96 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 SEC11B-201ENST00000518383 499 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AC116917.1-201ENST00000520558 305 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AC023158.1-201ENST00000561632 1025 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AL157899.1-201ENST00000604110 936 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 AC016597.2-201ENST00000613256 341 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 MIR6811-201ENST00000620409 58 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 MIR6823-201ENST00000622118 61 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 MIR6806-201ENST00000622141 64 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 AC090506.2-201ENST00000624521 419 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AL121936.2-201ENST00000641935 662 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 PSMC1P6-201ENST00000477233 1319 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
VPS50Q96JG6 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VPS50Q96JG6 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VPS50Q96JG6 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
VPS50Q96JG6 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
VPS50Q96JG6 PPBPP2-201ENST00000513150 1362 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 AC010624.4-201ENST00000597606 1351 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 LINC02019-201ENST00000608605 2060 ntBASIC6.18□□□□□ -1.42
VPS50Q96JG6 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS50Q96JG6 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VPS50Q96JG6 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms