Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 MTND6P12-201ENST00000428247 522 ntBASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AC096775.1-201ENST00000437724 448 ntBASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AC015983.1-201ENST00000441577 373 ntBASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AC023141.8-201ENST00000442554 208 ntBASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AL445665.1-202ENST00000452436 324 ntBASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AC007998.1-201ENST00000474156 672 ntBASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 NENFP3-201ENST00000503735 313 ntBASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 SNORD46.2-201ENST00000516021 102 ntBASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 SNORA70.20-201ENST00000516848 126 ntBASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 IGLV3-30-201ENST00000524362 298 ntBASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AC090424.1-201ENST00000535243 736 ntBASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AL121594.2-201ENST00000541658 472 ntBASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 FAM27E4-201ENST00000605259 342 ntBASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 ZNF101P1-201ENST00000435701 1720 ntBASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AL161756.3-201ENST00000641216 2071 ntBASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 AC022164.1-201ENST00000568767 2673 ntBASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 MIR375-201ENST00000362103 64 ntBASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 RNA5SP284-201ENST00000384547 118 ntBASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 AL121977.1-201ENST00000401636 979 ntBASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 NPM1P38-201ENST00000403835 865 ntBASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 SNORA11.3-201ENST00000408471 128 ntBASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 CDY17P-201ENST00000414121 1282 ntBASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 H3F3BP1-201ENST00000440551 403 ntBASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 AC004129.2-201ENST00000457229 287 ntBASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 UBFD1P1-201ENST00000473259 814 ntBASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 AC079600.1-201ENST00000550326 297 ntBASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 SNORA11.6-201ENST00000619030 128 ntBASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 Z95114.1-201ENST00000624264 14574 ntBASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 AL731532.1-201ENST00000623972 4236 ntBASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ECHDC3Q96DC8 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 AC106872.5-201ENST00000508856 1416 ntBASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 NEPNP-201ENST00000404786 1371 ntBASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 FBXL21-201ENST00000297158 1305 ntBASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ECHDC3Q96DC8 EEF1B2P8-201ENST00000414101 671 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms