Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.33□□□□□ -1.56
RFT1Q96AA3 FTH1P11-201ENST00000517577 551 ntBASIC5.33□□□□□ -1.56
RFT1Q96AA3 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.33□□□□□ -1.56
RFT1Q96AA3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.33□□□□□ -1.56
RFT1Q96AA3 AC004232.2-201ENST00000574245 821 ntBASIC5.33□□□□□ -1.56
RFT1Q96AA3 AC027796.1-201ENST00000575593 512 ntBASIC5.33□□□□□ -1.56
RFT1Q96AA3 MIR4732-201ENST00000581873 76 ntBASIC5.33□□□□□ -1.56
RFT1Q96AA3 QTRT1P1-201ENST00000604344 1078 ntBASIC5.33□□□□□ -1.56
RFT1Q96AA3 AL512413.1-201ENST00000606489 382 ntBASIC5.33□□□□□ -1.56
RFT1Q96AA3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.33□□□□□ -1.56
RFT1Q96AA3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.33□□□□□ -1.56
RFT1Q96AA3 AC022106.1-201ENST00000612834 766 ntBASIC5.33□□□□□ -1.56
RFT1Q96AA3 AF117829.2-201ENST00000619538 361 ntBASIC5.33□□□□□ -1.56
RFT1Q96AA3 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.33□□□□□ -1.56
RFT1Q96AA3 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.33□□□□□ -1.56
RFT1Q96AA3 AC068213.1-201ENST00000625124 226 ntBASIC5.33□□□□□ -1.56
RFT1Q96AA3 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.33□□□□□ -1.56
RFT1Q96AA3 AL359091.1-201ENST00000449048 1734 ntBASIC5.33□□□□□ -1.56
RFT1Q96AA3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.33□□□□□ -1.56
RFT1Q96AA3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFT1Q96AA3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFT1Q96AA3 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFT1Q96AA3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.33□□□□□ -1.56
RFT1Q96AA3 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFT1Q96AA3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFT1Q96AA3 AL161756.3-201ENST00000641216 2071 ntBASIC5.33□□□□□ -1.56
RFT1Q96AA3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RFT1Q96AA3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFT1Q96AA3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFT1Q96AA3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.33□□□□□ -1.56
RFT1Q96AA3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFT1Q96AA3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFT1Q96AA3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 AL603750.1-201ENST00000624216 1717 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 RNU6-249P-201ENST00000363016 102 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 RNU6-670P-201ENST00000364312 104 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 RNA5SP85-201ENST00000365378 119 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 UBTFL2-201ENST00000411859 1191 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 XKRYP6-201ENST00000440468 1116 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 XKRYP3-201ENST00000442113 1116 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 NPM1P19-201ENST00000450070 712 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 RPL31P11-202ENST00000454082 372 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 RARRES2P3-201ENST00000457739 473 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 RN7SL39P-201ENST00000462264 297 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 RN7SL352P-201ENST00000466002 277 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 RN7SL267P-201ENST00000485107 261 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC090958.1-201ENST00000511122 351 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC131935.1-201ENST00000524621 333 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFT1Q96AA3 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC037479.1-201ENST00000558361 625 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 RNU4ATAC-201ENST00000580972 127 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 AL591222.2-201ENST00000604443 754 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 AL022394.1-201ENST00000606979 292 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC016911.1-201ENST00000613297 452 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC020658.4-201ENST00000613987 684 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFT1Q96AA3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC024587.1-201ENST00000505925 2157 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.32□□□□□ -1.56
RFT1Q96AA3 AC005224.3-201ENST00000584683 2140 ntBASIC5.32□□□□□ -1.56
RFT1Q96AA3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFT1Q96AA3 AL158152.1-201ENST00000602652 1435 ntBASIC5.31□□□□□ -1.56
RFT1Q96AA3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFT1Q96AA3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFT1Q96AA3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.31□□□□□ -1.56
RFT1Q96AA3 AL133243.2-201ENST00000610331 1621 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms