Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC095052.1-201ENST00000509955 863 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 AC016550.3-201ENST00000515706 767 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 SNORA76.2-201ENST00000517095 137 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 RN7SKP183-201ENST00000517169 324 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.84□□□□□ -1.31
HPS3Q969F9 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.84□□□□□ -1.31
HPS3Q969F9 OSBPL9P3-201ENST00000534523 595 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HPS3Q969F9 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HPS3Q969F9 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.84□□□□□ -1.31
HPS3Q969F9 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.84□□□□□ -1.31
HPS3Q969F9 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.84□□□□□ -1.31
HPS3Q969F9 AC104072.1-201ENST00000568817 668 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 ZNF92P2-201ENST00000600543 1059 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.84□□□□□ -1.31
HPS3Q969F9 AC017076.1-201ENST00000607613 578 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.84□□□□□ -1.31
HPS3Q969F9 AL135999.3-201ENST00000610501 812 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HPS3Q969F9 MIR6811-201ENST00000620409 58 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 AP000943.4-201ENST00000622912 357 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 AC009120.7-201ENST00000623452 780 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 AC116667.2-201ENST00000641075 823 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 AC010325.3-201ENST00000641084 394 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.84□□□□□ -1.31
HPS3Q969F9 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.84□□□□□ -1.31
HPS3Q969F9 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.84□□□□□ -1.31
HPS3Q969F9 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HPS3Q969F9 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
HPS3Q969F9 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.84□□□□□ -1.31
HPS3Q969F9 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HPS3Q969F9 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
HPS3Q969F9 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
HPS3Q969F9 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.32
HPS3Q969F9 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.84□□□□□ -1.32
HPS3Q969F9 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HPS3Q969F9 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HPS3Q969F9 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
HPS3Q969F9 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.83□□□□□ -1.32
HPS3Q969F9 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HPS3Q969F9 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HPS3Q969F9 ICE2P1-201ENST00000512800 1849 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
HPS3Q969F9 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HPS3Q969F9 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HPS3Q969F9 AC017002.4-201ENST00000604721 1525 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.83□□□□□ -1.32
HPS3Q969F9 TMCC1P1-201ENST00000518897 1980 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
HPS3Q969F9 RN7SKP237-201ENST00000364663 301 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 RNU6-650P-201ENST00000365658 111 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
HPS3Q969F9 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 SNORA11.3-201ENST00000408471 128 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 RNA5SP198-201ENST00000410376 127 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 AL035422.1-201ENST00000414193 397 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.83□□□□□ -1.32
HPS3Q969F9 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.83□□□□□ -1.32
HPS3Q969F9 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.83□□□□□ -1.32
HPS3Q969F9 GAPDHP59-201ENST00000435908 267 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 AL590399.4-201ENST00000436561 601 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.83□□□□□ -1.32
HPS3Q969F9 AL590004.3-202ENST00000445883 451 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 MARK2P8-201ENST00000476069 952 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 AC108729.2-201ENST00000476543 840 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 AC098818.1-201ENST00000478593 252 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HPS3Q969F9 KHDC1P1-201ENST00000511053 508 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HPS3Q969F9 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.83□□□□□ -1.32
HPS3Q969F9 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.83□□□□□ -1.32
HPS3Q969F9 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.83□□□□□ -1.32
HPS3Q969F9 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.83□□□□□ -1.32
HPS3Q969F9 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.83□□□□□ -1.32
HPS3Q969F9 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.83□□□□□ -1.32
HPS3Q969F9 OR1E3-201ENST00000575608 948 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.83□□□□□ -1.32
HPS3Q969F9 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.83□□□□□ -1.32
HPS3Q969F9 ABI1P1-201ENST00000603375 1120 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 AC073333.2-201ENST00000603589 769 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 AC008555.7-201ENST00000605008 583 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.83□□□□□ -1.32
HPS3Q969F9 MIR7109-201ENST00000613748 65 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
HPS3Q969F9 AL163051.2-201ENST00000618976 735 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 SNORA11.6-201ENST00000619030 128 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.83□□□□□ -1.32
HPS3Q969F9 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HPS3Q969F9 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HPS3Q969F9 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HPS3Q969F9 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.83□□□□□ -1.32
HPS3Q969F9 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
HPS3Q969F9 AC005261.2-201ENST00000593427 4258 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 AKAP17BP-201ENST00000431706 2719 ntBASIC6.83□□□□□ -1.32
HPS3Q969F9 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HPS3Q969F9 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HPS3Q969F9 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.83□□□□□ -1.32
HPS3Q969F9 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HPS3Q969F9 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
HPS3Q969F9 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms