Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC021074.2-201ENST00000468434 172 ntBASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 RN7SL30P-201ENST00000488416 306 ntBASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 AC118282.1-201ENST00000506408 765 ntBASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 AC074050.1-201ENST00000563247 211 ntBASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 AC087575.1-201ENST00000585087 229 ntBASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 AC104763.3-201ENST00000613765 618 ntBASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 AP003789.1-201ENST00000617737 605 ntBASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 AL445493.3-201ENST00000619568 477 ntBASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 DDX6P1-205ENST00000441966 1436 ntBASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 AL356057.1-202ENST00000402263 756 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 AL589994.1-201ENST00000404962 340 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 UQCRFS1P3-201ENST00000407697 385 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 RN7SKP59-201ENST00000410520 314 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 RN7SKP121-201ENST00000410842 305 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 AC096644.3-201ENST00000416788 338 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 AC245884.2-201ENST00000426257 404 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 EEF1B2P6-201ENST00000445713 673 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 AC009963.4-201ENST00000448535 339 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 AC105420.1-201ENST00000504389 582 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 AC113192.3-201ENST00000529152 742 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 AC015911.5-201ENST00000587076 451 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 AC005776.1-201ENST00000603164 290 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 AL356986.1-201ENST00000604085 341 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 AL049840.6-201ENST00000604583 345 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 RPSAP73-201ENST00000614820 330 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 AC079949.2-201ENST00000617117 2933 ntBASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
SMC1BQ8NDV3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 RNA5SP46-201ENST00000362370 120 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 SNORA63.3-201ENST00000362682 132 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 RSL24D1P1-201ENST00000404972 493 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 RNA5SP156-201ENST00000410250 110 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 RBMY2KP-201ENST00000418221 992 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms