Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 OR5T3-201ENST00000303059 1023 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 RNU6-883P-201ENST00000384597 107 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 MIR1266-201ENST00000408125 84 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 VPS25P1-201ENST00000455691 508 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 RN7SL72P-201ENST00000460697 269 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 RPSAP37-201ENST00000470913 821 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 MARK2P8-201ENST00000476069 952 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AC114728.1-201ENST00000488289 483 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 snoU109.6-201ENST00000516831 118 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 OR9G2P-201ENST00000533326 880 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 OR4A40P-201ENST00000533878 948 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 MIR3189-201ENST00000578735 73 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AL589863.1-201ENST00000595383 631 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AC036176.3-201ENST00000602456 418 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AL021368.3-201ENST00000607119 578 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 SNORA74.4-201ENST00000607595 199 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AL162233.1-201ENST00000620014 944 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AOX3P-204ENST00000491025 2107 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AC017002.4-201ENST00000604721 1525 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 AC144833.1-201ENST00000567953 4089 ntBASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.78□□□□□ -1.48
LSMEM1Q8N8F7 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 FBXL21-201ENST00000297158 1305 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AC117409.1-201ENST00000470499 1310 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 RNU4-39P-201ENST00000362455 127 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 MIR433-201ENST00000384837 93 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 SNORD94-201ENST00000386037 137 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 RN7SKP129-201ENST00000410288 299 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 RPL21P50-201ENST00000417698 477 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AL354766.1-201ENST00000423396 542 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 NPM1P23-201ENST00000440193 849 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AC079922.1-201ENST00000443291 359 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AL445991.1-201ENST00000450381 475 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 RPS27AP3-201ENST00000453803 454 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AC018639.1-201ENST00000492994 442 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AC122714.1-201ENST00000502510 459 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AC095052.1-201ENST00000509955 863 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AC093770.1-201ENST00000511559 571 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AC093816.1-201ENST00000515076 913 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AC027796.1-201ENST00000575593 512 ntBASIC5.77□□□□□ -1.49
LSMEM1Q8N8F7 AC005332.4-201ENST00000592752 579 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms