Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AL121776.1-201ENST00000429337 372 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AC092106.1-201ENST00000444291 373 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 YWHAEP1-201ENST00000453697 763 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 RANP1-206ENST00000455094 651 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 UBA52P7-201ENST00000486088 380 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AC109481.1-201ENST00000509173 282 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 MRPS21P7-201ENST00000566937 238 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 RNU1-136P-201ENST00000384181 164 ntBASIC8.87□□□□□ -0.99
VPS8Q8N3P4 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 AL391361.1-201ENST00000405580 489 ntBASIC8.87□□□□□ -0.99
VPS8Q8N3P4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 KRTAP8-2P-201ENST00000440620 186 ntBASIC8.87□□□□□ -0.99
VPS8Q8N3P4 DNAJC19P5-201ENST00000443295 316 ntBASIC8.87□□□□□ -0.99
VPS8Q8N3P4 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 RN7SL583P-201ENST00000475692 287 ntBASIC8.87□□□□□ -0.99
VPS8Q8N3P4 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 AGGF1P7-201ENST00000562369 913 ntBASIC8.87□□□□□ -0.99
VPS8Q8N3P4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 AC109309.2-201ENST00000612597 332 ntBASIC8.87□□□□□ -0.99
VPS8Q8N3P4 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC8.87□□□□□ -0.99
VPS8Q8N3P4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 CD86-204ENST00000469710 1604 ntTSL 2 BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 RNA5SP183-201ENST00000362452 119 ntBASIC8.86□□□□□ -0.99
VPS8Q8N3P4 DNAJA1P3-201ENST00000399417 1194 ntBASIC8.86□□□□□ -0.99
VPS8Q8N3P4 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 PRUNEP1-201ENST00000425846 705 ntBASIC8.86□□□□□ -0.99
VPS8Q8N3P4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 RPL35AP19-201ENST00000469425 329 ntBASIC8.86□□□□□ -0.99
VPS8Q8N3P4 CSNK1A1P3-201ENST00000504105 330 ntBASIC8.86□□□□□ -0.99
VPS8Q8N3P4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 RBM22P12-201ENST00000567098 1255 ntBASIC8.86□□□□□ -0.99
VPS8Q8N3P4 AC060780.2-201ENST00000589047 198 ntBASIC8.86□□□□□ -0.99
VPS8Q8N3P4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 AL512624.1-201ENST00000613638 469 ntBASIC8.86□□□□□ -0.99
VPS8Q8N3P4 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
VPS8Q8N3P4 AL161912.4-201ENST00000623889 2468 ntBASIC8.85□□□□□ -0.99
VPS8Q8N3P4 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VPS8Q8N3P4 AL158152.1-201ENST00000602652 1435 ntBASIC8.85□□□□□ -0.99
VPS8Q8N3P4 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS8Q8N3P4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS8Q8N3P4 EEF1A1P33-201ENST00000554413 1362 ntBASIC8.85□□□□□ -0.99
VPS8Q8N3P4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS8Q8N3P4 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS8Q8N3P4 SNORA51.1-201ENST00000363243 140 ntBASIC8.85□□□□□ -0.99
VPS8Q8N3P4 TANK-203ENST00000402568 878 ntTSL 5 BASIC8.85□□□□□ -0.99
VPS8Q8N3P4 OR3A2-201ENST00000408891 1076 ntBASIC8.85□□□□□ -0.99
VPS8Q8N3P4 RNGTTP1-201ENST00000420965 728 ntBASIC8.85□□□□□ -0.99
VPS8Q8N3P4 AC018638.3-201ENST00000461273 132 ntBASIC8.85□□□□□ -0.99
VPS8Q8N3P4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC8.85□□□□□ -0.99
VPS8Q8N3P4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC8.85□□□□□ -0.99
VPS8Q8N3P4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC8.85□□□□□ -0.99
VPS8Q8N3P4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VPS8Q8N3P4 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VPS8Q8N3P4 HSPD1P7-201ENST00000447985 1686 ntBASIC8.85□□□□□ -0.99
VPS8Q8N3P4 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC8.85□□□□□ -0.99
VPS8Q8N3P4 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC8.85□□□□□ -0.99
VPS8Q8N3P4 AL021877.2-201ENST00000624442 10684 ntBASIC8.85□□□□□ -0.99
VPS8Q8N3P4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC8.85□□□□□ -0.99
VPS8Q8N3P4 AC089998.1-201ENST00000548575 3141 ntBASIC8.85□□□□□ -0.99
VPS8Q8N3P4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS8Q8N3P4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS8Q8N3P4 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
VPS8Q8N3P4 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VPS8Q8N3P4 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS8Q8N3P4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
VPS8Q8N3P4 AC010329.1-201ENST00000593903 8328 ntBASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms