Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SETP21-201ENST00000514799 892 ntBASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 RNA5SP340-201ENST00000517132 107 ntBASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 AC078899.1-201ENST00000521432 1185 ntBASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 WBP1LP3-201ENST00000523033 208 ntBASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 AL121594.2-201ENST00000541658 472 ntBASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 CYCSP38-201ENST00000559840 322 ntBASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 AL163952.1-202ENST00000569625 600 ntBASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 AC015689.2-201ENST00000528172 1738 ntBASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 LINC02019-201ENST00000608605 2060 ntBASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC65Q8IXS2 AF287957.1-201ENST00000607368 1595 ntBASIC6.52□□□□□ -1.36
CCDC65Q8IXS2 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 RSU1P1-201ENST00000453416 441 ntBASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 AC019084.1-201ENST00000457337 432 ntBASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 CST12P-201ENST00000457644 362 ntBASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 MIR4776-2-201ENST00000580204 80 ntBASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC65Q8IXS2 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AC027088.4-201ENST00000611559 1947 ntBASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 RN7SKP187-201ENST00000365536 330 ntBASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 NACAP7-201ENST00000407371 609 ntBASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AC069154.1-201ENST00000432914 542 ntBASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 KRT8P51-201ENST00000438938 274 ntBASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AC099521.1-201ENST00000482557 334 ntBASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 RN7SL649P-201ENST00000496974 275 ntBASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AC079905.1-201ENST00000549280 475 ntBASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 MIR6793-201ENST00000612376 63 ntBASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AC073593.1-201ENST00000624500 411 ntBASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AC097063.1-201ENST00000426714 1797 ntBASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 NLRP3P1-201ENST00000622303 1785 ntBASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC65Q8IXS2 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 AC232271.1-201ENST00000602455 2715 ntBASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 DEFA9P-201ENST00000433042 285 ntBASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.5□□□□□ -1.37
CCDC65Q8IXS2 VN1R110P-201ENST00000438988 971 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms