Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 VN1R81P-201ENST00000602085 372 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 WBP1LP12-201ENST00000604449 331 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 AL392112.1-201ENST00000605115 829 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 AC139769.3-201ENST00000618383 175 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 AC006453.3-201ENST00000635891 377 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 AC023886.2-201ENST00000321285 411 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 Y_RNA.89-201ENST00000363031 102 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 Y_RNA.145-201ENST00000363527 102 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 AC073464.1-201ENST00000429823 534 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 FMO7P-201ENST00000436045 768 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 AL353754.1-201ENST00000440219 340 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 WDR82P2-201ENST00000444540 928 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 RPLP0P1-201ENST00000457002 361 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 RPS14P7-201ENST00000473701 448 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 RPL21P42-201ENST00000488408 464 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 AC023050.1-201ENST00000498198 304 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 GAPDHP61-201ENST00000507324 1005 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 CHCHD2P7-201ENST00000508008 452 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 FGF7P4-201ENST00000509595 295 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 RNA5SP303-201ENST00000516192 130 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 AC061975.3-201ENST00000583209 244 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 RN7SL622P-201ENST00000585292 275 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 AC025287.2-201ENST00000621911 668 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 AC109454.4-201ENST00000623411 649 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 LINC01739-205ENST00000641890 573 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 PHACTR2P1-201ENST00000605639 1414 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 THAP12P3-201ENST00000456373 2266 ntBASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NPAS3Q8IXF0 CD46-209ENST00000367047 3089 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 SAMMSON-203ENST00000641005 2168 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 AL161891.1-201ENST00000621575 4636 ntBASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS3Q8IXF0 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms