Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 GLULP6-201ENST00000399502 913 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AC044797.1-201ENST00000445744 679 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AC013399.1-201ENST00000450311 418 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 RPEP1-201ENST00000504507 658 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AL049872.1-201ENST00000556323 322 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AL353662.3-201ENST00000625131 237 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AC087269.2-201ENST00000641764 975 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AC119674.1-204ENST00000641348 1343 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AP001541.1-201ENST00000623322 1904 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AC091046.3-201ENST00000631455 1574 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 SNORA70.2-201ENST00000364506 135 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 U3.36-201ENST00000408418 213 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 OR52B5P-201ENST00000435337 951 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 RN7SL561P-201ENST00000488553 281 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AC093799.2-201ENST00000610062 578 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 OR52B5P-202ENST00000641118 1110 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AL121835.2-201ENST00000624253 3502 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AL117339.4-201ENST00000608335 7063 ntBASIC5.67□□□□□ -1.5
RIF1Q5UIP0 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 AC004014.2-201ENST00000623718 5122 ntBASIC5.66□□□□□ -1.5
RIF1Q5UIP0 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 RNA5SP515-201ENST00000364570 118 ntBASIC5.66□□□□□ -1.5
RIF1Q5UIP0 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 AC002075.1-201ENST00000457396 676 ntBASIC5.66□□□□□ -1.5
RIF1Q5UIP0 SLC25A15P5-201ENST00000508033 253 ntBASIC5.66□□□□□ -1.5
RIF1Q5UIP0 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 MFSD8-217ENST00000641178 4374 ntBASIC5.66□□□□□ -1.5
RIF1Q5UIP0 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 RNU1-77P-201ENST00000390868 162 ntBASIC5.66□□□□□ -1.5
RIF1Q5UIP0 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 TRGV7-201ENST00000427089 353 ntBASIC5.66□□□□□ -1.5
RIF1Q5UIP0 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 AC092824.1-201ENST00000483524 576 ntBASIC5.66□□□□□ -1.5
RIF1Q5UIP0 AC114728.1-201ENST00000488289 483 ntBASIC5.66□□□□□ -1.5
RIF1Q5UIP0 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 AC034205.1-201ENST00000520621 638 ntBASIC5.66□□□□□ -1.5
RIF1Q5UIP0 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 PARP1P2-201ENST00000556806 195 ntBASIC5.66□□□□□ -1.5
RIF1Q5UIP0 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RIF1Q5UIP0 PANDAR-201ENST00000629595 1506 ntBASIC5.66□□□□□ -1.5
RIF1Q5UIP0 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 AC005332.9-201ENST00000620266 2921 ntBASIC5.65□□□□□ -1.5
RIF1Q5UIP0 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 AC011455.2-201ENST00000599320 3336 ntBASIC5.65□□□□□ -1.5
RIF1Q5UIP0 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RIF1Q5UIP0 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms