Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 NPM1P28-201ENST00000492269 840 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC38Q502W7 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC38Q502W7 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AC025768.1-201ENST00000510057 267 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 MTND1P36-201ENST00000522384 936 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 CKS1BP1-201ENST00000555221 240 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 MIR4732-201ENST00000581873 76 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 SYPL1P2-201ENST00000582878 727 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AL671309.1-201ENST00000603750 544 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 AL136370.1-201ENST00000608166 691 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AC135803.1-201ENST00000608748 565 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 MIR6503-201ENST00000622884 86 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 AC000095.2-202ENST00000637415 154 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AC017002.4-201ENST00000604721 1525 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC38Q502W7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AL442128.2-201ENST00000620246 1824 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC38Q502W7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC38Q502W7 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC38Q502W7 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC38Q502W7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 AL512283.1-201ENST00000606756 1384 ntBASIC6.43□□□□□ -1.38
CCDC38Q502W7 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC38Q502W7 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC38Q502W7 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC38Q502W7 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC125336.1-201ENST00000508893 2827 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC38Q502W7 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC38Q502W7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC38Q502W7 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC38Q502W7 SNORD16-201ENST00000362803 99 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 RNA5SP85-201ENST00000365378 119 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 MIR433-201ENST00000384837 93 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 AL356057.1-202ENST00000402263 756 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 PTP4A1P1-201ENST00000420539 515 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AL354766.1-201ENST00000423396 542 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 MTND4P24-201ENST00000424002 397 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC38Q502W7 RPS26P4-201ENST00000431743 355 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC245517.2-201ENST00000442890 346 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 VPS25P1-201ENST00000455691 508 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 MTND2P30-201ENST00000456663 382 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 OR9A1P-202ENST00000484361 945 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC015524.1-201ENST00000491585 472 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC093770.1-201ENST00000511559 571 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 RNA5SP400-201ENST00000517155 111 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC084851.2-201ENST00000530377 364 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC090079.2-201ENST00000575289 768 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC38Q502W7 BMS1P7-201ENST00000602440 1052 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC005014.3-201ENST00000605985 190 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC005021.1-201ENST00000608730 355 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC068726.1-201ENST00000610993 341 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 CR589904.2-201ENST00000612533 440 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 AL512506.1-201ENST00000613918 449 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC048341.3-201ENST00000619323 491 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AP002371.2-201ENST00000624450 503 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms