Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 AC234772.1-201ENST00000377927 937 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 RNA5SP122-201ENST00000384457 108 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 AL663061.1-201ENST00000416625 580 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 AC008173.1-201ENST00000418901 264 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 AC115283.1-201ENST00000427353 400 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 AC239367.3-201ENST00000428996 814 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 AC015983.1-201ENST00000441577 373 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 RN7SL423P-201ENST00000486202 304 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 MTND6P8-201ENST00000503471 522 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 SNORA58-201ENST00000505219 137 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 BTG4P1-201ENST00000510421 183 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 CASP1-216ENST00000534497 825 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 AC091057.3-201ENST00000602684 733 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 SMIM12P1-201ENST00000603004 274 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 AC023762.1-201ENST00000603280 584 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 AL135999.3-201ENST00000610501 812 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 BX284613.1-201ENST00000452221 1641 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.52□□□□□ -1.21
CCDC144BQ3MJ40 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 CUBNP3-201ENST00000457461 1784 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 RNA5SP433-201ENST00000364491 114 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 RNU4-7P-201ENST00000364758 141 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 RNU6-796P-201ENST00000391086 107 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 RN7SKP240-201ENST00000410583 375 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 RMRPP5-201ENST00000411156 267 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 RPS7P12-201ENST00000422385 582 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AC241520.1-201ENST00000422654 1099 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AC007679.3-201ENST00000434035 414 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 EIF5AP4-201ENST00000441206 465 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 HMGN1P2-201ENST00000445197 310 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 COX4I1P2-201ENST00000447446 547 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AC020779.1-201ENST00000478757 796 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AC133963.2-201ENST00000513686 578 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AC106734.1-201ENST00000568646 663 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 MIR4502-201ENST00000580432 81 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AC245100.7-201ENST00000609678 442 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AC068787.1-201ENST00000623908 691 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AC018659.2-201ENST00000624690 715 ntBASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC144BQ3MJ40 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms