Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.05□□□□□ -1.28
RFX7Q2KHR2 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 RNA5SP46-201ENST00000362370 120 ntBASIC7.05□□□□□ -1.28
RFX7Q2KHR2 RNA5SP394-201ENST00000364216 119 ntBASIC7.05□□□□□ -1.28
RFX7Q2KHR2 RNA5SP132-201ENST00000364725 118 ntBASIC7.05□□□□□ -1.28
RFX7Q2KHR2 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 MRPL53P1-201ENST00000414323 319 ntBASIC7.05□□□□□ -1.28
RFX7Q2KHR2 AC073909.1-201ENST00000447112 999 ntBASIC7.05□□□□□ -1.28
RFX7Q2KHR2 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 RPSAP37-201ENST00000470913 821 ntBASIC7.05□□□□□ -1.28
RFX7Q2KHR2 PDCL3P4-201ENST00000489621 720 ntBASIC7.05□□□□□ -1.28
RFX7Q2KHR2 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 AC078899.1-201ENST00000521432 1185 ntBASIC7.05□□□□□ -1.28
RFX7Q2KHR2 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.05□□□□□ -1.28
RFX7Q2KHR2 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.05□□□□□ -1.28
RFX7Q2KHR2 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 AP002833.3-201ENST00000625075 2265 ntBASIC7.04□□□□□ -1.28
RFX7Q2KHR2 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 LINC01963-201ENST00000562038 3148 ntBASIC7.04□□□□□ -1.28
RFX7Q2KHR2 PARP4P2-201ENST00000446672 3326 ntBASIC7.04□□□□□ -1.28
RFX7Q2KHR2 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 RN7SKP29-201ENST00000410957 272 ntBASIC7.04□□□□□ -1.28
RFX7Q2KHR2 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 AL513325.1-201ENST00000417716 1034 ntBASIC7.04□□□□□ -1.28
RFX7Q2KHR2 RPL34P3-201ENST00000421454 338 ntBASIC7.04□□□□□ -1.28
RFX7Q2KHR2 AC019205.1-201ENST00000421830 730 ntBASIC7.04□□□□□ -1.28
RFX7Q2KHR2 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 DEFA9P-201ENST00000433042 285 ntBASIC7.04□□□□□ -1.28
RFX7Q2KHR2 GAPDHP48-201ENST00000436626 961 ntBASIC7.04□□□□□ -1.28
RFX7Q2KHR2 AC002504.1-201ENST00000438281 691 ntBASIC7.04□□□□□ -1.28
RFX7Q2KHR2 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.04□□□□□ -1.28
RFX7Q2KHR2 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 ST13P12-201ENST00000508958 1094 ntBASIC7.04□□□□□ -1.28
RFX7Q2KHR2 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 RNA5SP116-201ENST00000516132 98 ntBASIC7.04□□□□□ -1.28
RFX7Q2KHR2 AC027308.1-201ENST00000517993 110 ntBASIC7.04□□□□□ -1.28
RFX7Q2KHR2 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 RARSP1-201ENST00000542842 1418 ntBASIC7.04□□□□□ -1.28
RFX7Q2KHR2 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.04□□□□□ -1.28
RFX7Q2KHR2 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFX7Q2KHR2 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
RFX7Q2KHR2 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RFX7Q2KHR2 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RFX7Q2KHR2 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFX7Q2KHR2 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
RFX7Q2KHR2 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFX7Q2KHR2 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFX7Q2KHR2 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RFX7Q2KHR2 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFX7Q2KHR2 IMMTP1-201ENST00000435590 2219 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms