Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL158152.1-201ENST00000602652 1435 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 U3.10-201ENST00000364459 214 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 RNA5SP431-201ENST00000410312 120 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AL136231.1-201ENST00000429407 730 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 RPS19P6-201ENST00000441327 433 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 RPSAP40-201ENST00000442343 891 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AL356121.1-201ENST00000442911 156 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AC099670.1-201ENST00000455141 783 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 RPS7P10-201ENST00000464254 603 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 H3F3AP5-201ENST00000475267 429 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 CCDC11P1-201ENST00000503137 1162 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 TOMM22P4-201ENST00000511318 336 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 OR56A7P-201ENST00000524865 941 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AC021269.1-201ENST00000526860 705 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AC244502.2-201ENST00000543361 851 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AP001823.1-201ENST00000604056 1003 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AC011891.2-201ENST00000604949 397 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 RFPL4AP6-201ENST00000616792 846 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AC099654.6-201ENST00000636487 512 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 AP001029.2-203ENST00000589795 4910 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.54□□□□□ -1.68
HIST1H1AQ02539 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.54□□□□□ -1.68
HIST1H1AQ02539 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AL034546.1-201ENST00000623740 3693 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 CASC19-248ENST00000641674 1356 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AL022322.2-201ENST00000624072 20397 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 RNU6-249P-201ENST00000363016 102 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 MIR551B-201ENST00000384984 96 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AL132875.1-201ENST00000403623 949 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 MYL6P5-201ENST00000412707 459 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 HSPE1P16-201ENST00000426640 348 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AC138761.5-201ENST00000433967 325 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 ACA64.4-201ENST00000459070 127 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AC079080.1-201ENST00000479841 822 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AC095052.1-201ENST00000509955 863 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.53□□□□□ -1.68
HIST1H1AQ02539 SNORA74.1-201ENST00000516320 180 ntBASIC4.53□□□□□ -1.68
HIST1H1AQ02539 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms