Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC019205.1-201ENST00000421830 730 ntBASIC5.64□□□□□ -1.51
CDH12P55289 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH12P55289 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH12P55289 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH12P55289 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH12P55289 CXCR2P1-202ENST00000443392 1074 ntBASIC5.64□□□□□ -1.51
CDH12P55289 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH12P55289 AL133351.3-201ENST00000454998 193 ntBASIC5.64□□□□□ -1.51
CDH12P55289 RARRES2P3-201ENST00000457739 473 ntBASIC5.64□□□□□ -1.51
CDH12P55289 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH12P55289 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH12P55289 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.64□□□□□ -1.51
CDH12P55289 SNX18P24-201ENST00000505249 671 ntBASIC5.64□□□□□ -1.51
CDH12P55289 AC016550.1-201ENST00000505348 785 ntBASIC5.64□□□□□ -1.51
CDH12P55289 AC119751.4-201ENST00000507498 357 ntBASIC5.64□□□□□ -1.51
CDH12P55289 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH12P55289 Y_RNA.710-201ENST00000516975 110 ntBASIC5.64□□□□□ -1.51
CDH12P55289 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH12P55289 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH12P55289 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH12P55289 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH12P55289 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.64□□□□□ -1.51
CDH12P55289 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH12P55289 AC244502.2-201ENST00000543361 851 ntBASIC5.64□□□□□ -1.51
CDH12P55289 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH12P55289 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.64□□□□□ -1.51
CDH12P55289 CKS1BP1-201ENST00000555221 240 ntBASIC5.64□□□□□ -1.51
CDH12P55289 AC027176.2-201ENST00000559166 746 ntBASIC5.64□□□□□ -1.51
CDH12P55289 AC063977.7-201ENST00000594454 337 ntBASIC5.64□□□□□ -1.51
CDH12P55289 RPAP2P1-201ENST00000603626 1168 ntBASIC5.64□□□□□ -1.51
CDH12P55289 AL450270.1-201ENST00000606160 391 ntBASIC5.64□□□□□ -1.51
CDH12P55289 AL136097.3-201ENST00000611097 505 ntBASIC5.64□□□□□ -1.51
CDH12P55289 RN7SL261P-201ENST00000613441 282 ntBASIC5.64□□□□□ -1.51
CDH12P55289 AC023510.2-201ENST00000622162 746 ntBASIC5.64□□□□□ -1.51
CDH12P55289 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CDH12P55289 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH12P55289 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH12P55289 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.64□□□□□ -1.51
CDH12P55289 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CDH12P55289 AL121839.2-201ENST00000565058 6943 ntBASIC5.64□□□□□ -1.51
CDH12P55289 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH12P55289 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH12P55289 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
CDH12P55289 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH12P55289 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH12P55289 AL161756.3-201ENST00000641216 2071 ntBASIC5.63□□□□□ -1.51
CDH12P55289 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CDH12P55289 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH12P55289 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH12P55289 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH12P55289 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH12P55289 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH12P55289 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CDH12P55289 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH12P55289 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH12P55289 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH12P55289 RNA5SP375-201ENST00000362975 119 ntBASIC5.63□□□□□ -1.51
CDH12P55289 RNA5SP77-201ENST00000365394 120 ntBASIC5.63□□□□□ -1.51
CDH12P55289 RNU6-40P-201ENST00000384254 107 ntBASIC5.63□□□□□ -1.51
CDH12P55289 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDH12P55289 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDH12P55289 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH12P55289 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.63□□□□□ -1.51
CDH12P55289 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH12P55289 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH12P55289 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH12P55289 GAPDHP19-201ENST00000431768 1005 ntBASIC5.63□□□□□ -1.51
CDH12P55289 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH12P55289 AC073410.1-201ENST00000435125 589 ntBASIC5.63□□□□□ -1.51
CDH12P55289 RPEP4-201ENST00000437636 602 ntBASIC5.63□□□□□ -1.51
CDH12P55289 RPS19P6-201ENST00000441327 433 ntBASIC5.63□□□□□ -1.51
CDH12P55289 PA2G4P1-201ENST00000442248 1197 ntBASIC5.63□□□□□ -1.51
CDH12P55289 RNF2P1-201ENST00000442955 1010 ntBASIC5.63□□□□□ -1.51
CDH12P55289 AC092601.1-201ENST00000444526 383 ntBASIC5.63□□□□□ -1.51
CDH12P55289 RN7SL393P-201ENST00000463588 296 ntBASIC5.63□□□□□ -1.51
CDH12P55289 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH12P55289 AC093719.1-201ENST00000480427 441 ntBASIC5.63□□□□□ -1.51
CDH12P55289 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH12P55289 AC093763.2-201ENST00000505334 1223 ntBASIC5.63□□□□□ -1.51
CDH12P55289 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH12P55289 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH12P55289 RNU6-491P-201ENST00000516099 110 ntBASIC5.63□□□□□ -1.51
CDH12P55289 RNU6-415P-201ENST00000516252 97 ntBASIC5.63□□□□□ -1.51
CDH12P55289 SEC11B-201ENST00000518383 499 ntBASIC5.63□□□□□ -1.51
CDH12P55289 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH12P55289 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH12P55289 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.63□□□□□ -1.51
CDH12P55289 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH12P55289 HMGN1P26-201ENST00000558737 303 ntBASIC5.63□□□□□ -1.51
CDH12P55289 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH12P55289 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.63□□□□□ -1.51
CDH12P55289 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
CDH12P55289 AC093524.1-201ENST00000564266 1094 ntBASIC5.63□□□□□ -1.51
CDH12P55289 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH12P55289 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH12P55289 BNIP3P40-201ENST00000596017 556 ntBASIC5.63□□□□□ -1.51
CDH12P55289 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH12P55289 AC022106.1-201ENST00000612834 766 ntBASIC5.63□□□□□ -1.51
CDH12P55289 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.63□□□□□ -1.51
CDH12P55289 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms