Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.84□□□□□ -1.47
PDX1P52945 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.84□□□□□ -1.47
PDX1P52945 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.84□□□□□ -1.47
PDX1P52945 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDX1P52945 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.84□□□□□ -1.47
PDX1P52945 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.84□□□□□ -1.47
PDX1P52945 OR4A40P-201ENST00000533878 948 ntBASIC5.84□□□□□ -1.47
PDX1P52945 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
PDX1P52945 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDX1P52945 AL136131.3-201ENST00000607600 188 ntBASIC5.84□□□□□ -1.47
PDX1P52945 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.84□□□□□ -1.47
PDX1P52945 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
PDX1P52945 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.84□□□□□ -1.47
PDX1P52945 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.84□□□□□ -1.47
PDX1P52945 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PDX1P52945 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.84□□□□□ -1.47
PDX1P52945 AC024587.1-201ENST00000505925 2157 ntBASIC5.84□□□□□ -1.47
PDX1P52945 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDX1P52945 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDX1P52945 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDX1P52945 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDX1P52945 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PDX1P52945 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
PDX1P52945 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.84□□□□□ -1.48
PDX1P52945 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.84□□□□□ -1.48
PDX1P52945 AC027088.4-201ENST00000611559 1947 ntBASIC5.84□□□□□ -1.48
PDX1P52945 AP001541.1-201ENST00000623322 1904 ntBASIC5.84□□□□□ -1.48
PDX1P52945 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.84□□□□□ -1.48
PDX1P52945 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PDX1P52945 AP002833.3-201ENST00000625075 2265 ntBASIC5.83□□□□□ -1.48
PDX1P52945 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.83□□□□□ -1.48
PDX1P52945 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PDX1P52945 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDX1P52945 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
PDX1P52945 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PDX1P52945 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDX1P52945 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
PDX1P52945 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDX1P52945 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDX1P52945 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PDX1P52945 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PDX1P52945 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.83□□□□□ -1.48
PDX1P52945 GTF3AP1-201ENST00000416942 1004 ntBASIC5.83□□□□□ -1.48
PDX1P52945 AL513325.1-201ENST00000417716 1034 ntBASIC5.83□□□□□ -1.48
PDX1P52945 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.83□□□□□ -1.48
PDX1P52945 AC093155.2-201ENST00000420734 937 ntBASIC5.83□□□□□ -1.48
PDX1P52945 BRWD1P3-201ENST00000428816 390 ntBASIC5.83□□□□□ -1.48
PDX1P52945 RSL24D1P2-201ENST00000445584 366 ntBASIC5.83□□□□□ -1.48
PDX1P52945 AL022319.1-201ENST00000458183 1167 ntBASIC5.83□□□□□ -1.48
PDX1P52945 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.83□□□□□ -1.48
PDX1P52945 OR52A4P-203ENST00000498233 1014 ntBASIC5.83□□□□□ -1.48
PDX1P52945 AC008945.1-201ENST00000505144 499 ntBASIC5.83□□□□□ -1.48
PDX1P52945 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.83□□□□□ -1.48
PDX1P52945 RNA5SP400-201ENST00000517155 111 ntBASIC5.83□□□□□ -1.48
PDX1P52945 TMEM97P2-201ENST00000517841 403 ntBASIC5.83□□□□□ -1.48
PDX1P52945 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.83□□□□□ -1.48
PDX1P52945 SUMO2P19-201ENST00000518920 295 ntBASIC5.83□□□□□ -1.48
PDX1P52945 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.83□□□□□ -1.48
PDX1P52945 AC112191.2-201ENST00000522428 333 ntBASIC5.83□□□□□ -1.48
PDX1P52945 WBP1LP3-201ENST00000523033 208 ntBASIC5.83□□□□□ -1.48
PDX1P52945 AC026616.1-201ENST00000523157 525 ntBASIC5.83□□□□□ -1.48
PDX1P52945 RPA2P3-201ENST00000533268 770 ntBASIC5.83□□□□□ -1.48
PDX1P52945 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.83□□□□□ -1.48
PDX1P52945 AC051619.2-201ENST00000559063 397 ntBASIC5.83□□□□□ -1.48
PDX1P52945 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.83□□□□□ -1.48
PDX1P52945 MIR4489-201ENST00000578869 62 ntBASIC5.83□□□□□ -1.48
PDX1P52945 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.83□□□□□ -1.48
PDX1P52945 AL133406.3-201ENST00000606817 541 ntBASIC5.83□□□□□ -1.48
PDX1P52945 AC116667.2-201ENST00000641075 823 ntBASIC5.83□□□□□ -1.48
PDX1P52945 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.83□□□□□ -1.48
PDX1P52945 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.83□□□□□ -1.48
PDX1P52945 AC073365.1-203ENST00000641055 1992 ntBASIC5.83□□□□□ -1.48
PDX1P52945 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDX1P52945 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
PDX1P52945 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PDX1P52945 AC092692.1-201ENST00000623625 2595 ntBASIC5.83□□□□□ -1.48
PDX1P52945 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDX1P52945 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
PDX1P52945 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDX1P52945 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDX1P52945 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PDX1P52945 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.83□□□□□ -1.48
PDX1P52945 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDX1P52945 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDX1P52945 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDX1P52945 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PDX1P52945 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDX1P52945 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PDX1P52945 HSPD1P8-201ENST00000400121 1658 ntBASIC5.82□□□□□ -1.48
PDX1P52945 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PDX1P52945 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDX1P52945 AL161901.1-201ENST00000624954 3425 ntBASIC5.82□□□□□ -1.48
PDX1P52945 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PDX1P52945 AC092724.1-201ENST00000624623 3397 ntBASIC5.82□□□□□ -1.48
PDX1P52945 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDX1P52945 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.82□□□□□ -1.48
PDX1P52945 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PDX1P52945 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDX1P52945 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDX1P52945 AL360271.1-201ENST00000395679 510 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms