Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC007064.3-201ENST00000422608 359 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.25□□□□□ -1.41
PTPN9P43378 MAPRE1P3-201ENST00000435438 796 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 RPSAP40-201ENST00000442343 891 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.25□□□□□ -1.41
PTPN9P43378 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.25□□□□□ -1.41
PTPN9P43378 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.25□□□□□ -1.41
PTPN9P43378 AC023245.1-201ENST00000468501 517 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.25□□□□□ -1.41
PTPN9P43378 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.25□□□□□ -1.41
PTPN9P43378 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.25□□□□□ -1.41
PTPN9P43378 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.25□□□□□ -1.41
PTPN9P43378 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 OR4A42P-201ENST00000531397 938 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.25□□□□□ -1.41
PTPN9P43378 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PTPN9P43378 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.25□□□□□ -1.41
PTPN9P43378 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.25□□□□□ -1.41
PTPN9P43378 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.25□□□□□ -1.41
PTPN9P43378 AP005119.1-201ENST00000580956 292 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.25□□□□□ -1.41
PTPN9P43378 AC005014.3-201ENST00000605985 190 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.25□□□□□ -1.41
PTPN9P43378 AC097641.3-201ENST00000613523 464 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.25□□□□□ -1.41
PTPN9P43378 AL031658.2-201ENST00000616850 651 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PTPN9P43378 AP001052.1-201ENST00000626421 99 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.25□□□□□ -1.41
PTPN9P43378 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PTPN9P43378 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PTPN9P43378 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PTPN9P43378 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
PTPN9P43378 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PTPN9P43378 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.25□□□□□ -1.41
PTPN9P43378 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PTPN9P43378 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
PTPN9P43378 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTPN9P43378 AC130304.1-201ENST00000622942 2385 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
PTPN9P43378 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.24□□□□□ -1.41
PTPN9P43378 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.24□□□□□ -1.41
PTPN9P43378 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTPN9P43378 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PTPN9P43378 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PTPN9P43378 RNU1-65P-201ENST00000363919 148 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.24□□□□□ -1.41
PTPN9P43378 GNG5P2-201ENST00000372054 207 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 AL050305.1-201ENST00000399993 1230 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 AL121977.1-201ENST00000401636 979 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.24□□□□□ -1.41
PTPN9P43378 AL096711.1-201ENST00000404780 554 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 GABARAPL3-201ENST00000412799 354 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.24□□□□□ -1.41
PTPN9P43378 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC6.24□□□□□ -1.41
PTPN9P43378 OR5W1P-201ENST00000423705 938 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 AC099677.3-201ENST00000427081 395 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.24□□□□□ -1.41
PTPN9P43378 NDUFA5P1-201ENST00000433858 341 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 AC007679.3-201ENST00000434035 414 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 RPS7P3-201ENST00000443360 580 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 CFL1P4-201ENST00000451536 498 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 CTSLP6-201ENST00000458273 1002 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 TRBV5-2-201ENST00000489095 273 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.24□□□□□ -1.41
PTPN9P43378 ATG10-AS1-201ENST00000504846 648 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.24□□□□□ -1.41
PTPN9P43378 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.24□□□□□ -1.41
PTPN9P43378 RNU6-943P-201ENST00000516960 98 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.24□□□□□ -1.41
PTPN9P43378 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.24□□□□□ -1.41
PTPN9P43378 OR4A6P-201ENST00000534364 970 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 AC006512.2-201ENST00000543250 486 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
PTPN9P43378 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PTPN9P43378 MIR6780B-201ENST00000610307 79 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.24□□□□□ -1.41
PTPN9P43378 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTPN9P43378 AC009032.1-201ENST00000617574 431 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 AL163152.1-201ENST00000642001 374 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PTPN9P43378 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.24□□□□□ -1.41
PTPN9P43378 AC022164.1-201ENST00000568767 2673 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
PTPN9P43378 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTPN9P43378 QRSL1P1-201ENST00000400977 1540 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 OR51C1P-202ENST00000641159 1444 ntBASIC6.24□□□□□ -1.41
PTPN9P43378 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.24□□□□□ -1.41
PTPN9P43378 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.24□□□□□ -1.41
PTPN9P43378 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.23□□□□□ -1.41
PTPN9P43378 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.23□□□□□ -1.41
PTPN9P43378 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 AC006600.2-201ENST00000624834 2506 ntBASIC6.23□□□□□ -1.41
PTPN9P43378 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.23□□□□□ -1.41
PTPN9P43378 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTPN9P43378 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PTPN9P43378 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
PTPN9P43378 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms