Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC117434.1-201ENST00000419971 836 ntBASIC6.39□□□□□ -1.39
MTHFRP42898 AL627308.1-201ENST00000435693 821 ntBASIC6.39□□□□□ -1.39
MTHFRP42898 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.39□□□□□ -1.39
MTHFRP42898 GAPDHP23-201ENST00000444823 993 ntBASIC6.39□□□□□ -1.39
MTHFRP42898 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.39□□□□□ -1.39
MTHFRP42898 RPL5P16-201ENST00000471467 790 ntBASIC6.39□□□□□ -1.39
MTHFRP42898 SNORA58-201ENST00000505219 137 ntBASIC6.39□□□□□ -1.39
MTHFRP42898 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
MTHFRP42898 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.39□□□□□ -1.39
MTHFRP42898 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.39□□□□□ -1.39
MTHFRP42898 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.39□□□□□ -1.39
MTHFRP42898 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.39□□□□□ -1.39
MTHFRP42898 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.39□□□□□ -1.39
MTHFRP42898 AC012254.3-201ENST00000591183 2117 ntBASIC6.39□□□□□ -1.39
MTHFRP42898 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.39□□□□□ -1.39
MTHFRP42898 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC6.39□□□□□ -1.39
MTHFRP42898 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.39□□□□□ -1.39
MTHFRP42898 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MTHFRP42898 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.39□□□□□ -1.39
MTHFRP42898 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MTHFRP42898 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
MTHFRP42898 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.39□□□□□ -1.39
MTHFRP42898 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MTHFRP42898 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MTHFRP42898 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MTHFRP42898 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
MTHFRP42898 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.39□□□□□ -1.39
MTHFRP42898 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
MTHFRP42898 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.39□□□□□ -1.39
MTHFRP42898 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
MTHFRP42898 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MTHFRP42898 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.38□□□□□ -1.39
MTHFRP42898 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
MTHFRP42898 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
MTHFRP42898 AC020633.1-201ENST00000468439 2247 ntBASIC6.38□□□□□ -1.39
MTHFRP42898 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MTHFRP42898 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
MTHFRP42898 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
MTHFRP42898 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MTHFRP42898 OR9K1P-201ENST00000326513 941 ntBASIC6.38□□□□□ -1.39
MTHFRP42898 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.38□□□□□ -1.39
MTHFRP42898 RNA5SP478-201ENST00000364657 115 ntBASIC6.38□□□□□ -1.39
MTHFRP42898 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.38□□□□□ -1.39
MTHFRP42898 MIR937-201ENST00000401271 86 ntBASIC6.38□□□□□ -1.39
MTHFRP42898 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.38□□□□□ -1.39
MTHFRP42898 AL096829.1-201ENST00000413677 457 ntBASIC6.38□□□□□ -1.39
MTHFRP42898 AL354890.1-201ENST00000413730 346 ntBASIC6.38□□□□□ -1.39
MTHFRP42898 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MTHFRP42898 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.38□□□□□ -1.39
MTHFRP42898 AL355433.1-201ENST00000422804 300 ntBASIC6.38□□□□□ -1.39
MTHFRP42898 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
MTHFRP42898 AC002504.1-201ENST00000438281 691 ntBASIC6.38□□□□□ -1.39
MTHFRP42898 SBDSP1-204ENST00000453858 737 ntBASIC6.38□□□□□ -1.39
MTHFRP42898 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.38□□□□□ -1.39
MTHFRP42898 RN7SL466P-201ENST00000497546 295 ntBASIC6.38□□□□□ -1.39
MTHFRP42898 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.38□□□□□ -1.39
MTHFRP42898 AC138409.2-202ENST00000507274 458 ntBASIC6.38□□□□□ -1.39
MTHFRP42898 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MTHFRP42898 KCTD9P4-201ENST00000526766 1166 ntBASIC6.38□□□□□ -1.39
MTHFRP42898 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
MTHFRP42898 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.38□□□□□ -1.39
MTHFRP42898 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.38□□□□□ -1.39
MTHFRP42898 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.38□□□□□ -1.39
MTHFRP42898 AL356801.1-201ENST00000559320 294 ntBASIC6.38□□□□□ -1.39
MTHFRP42898 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.38□□□□□ -1.39
MTHFRP42898 AC104695.2-201ENST00000605056 775 ntBASIC6.38□□□□□ -1.39
MTHFRP42898 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.38□□□□□ -1.39
MTHFRP42898 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.38□□□□□ -1.39
MTHFRP42898 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.38□□□□□ -1.39
MTHFRP42898 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
MTHFRP42898 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.38□□□□□ -1.39
MTHFRP42898 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.38□□□□□ -1.39
MTHFRP42898 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.38□□□□□ -1.39
MTHFRP42898 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MTHFRP42898 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
MTHFRP42898 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
MTHFRP42898 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
MTHFRP42898 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
MTHFRP42898 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MTHFRP42898 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
MTHFRP42898 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MTHFRP42898 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
MTHFRP42898 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MTHFRP42898 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.37□□□□□ -1.39
MTHFRP42898 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MTHFRP42898 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
MTHFRP42898 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MTHFRP42898 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MTHFRP42898 SNORA43.1-201ENST00000364863 140 ntBASIC6.37□□□□□ -1.39
MTHFRP42898 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
MTHFRP42898 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.37□□□□□ -1.39
MTHFRP42898 OR2AT2P-201ENST00000413438 905 ntBASIC6.37□□□□□ -1.39
MTHFRP42898 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.37□□□□□ -1.39
MTHFRP42898 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.37□□□□□ -1.39
MTHFRP42898 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.37□□□□□ -1.39
MTHFRP42898 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.37□□□□□ -1.39
MTHFRP42898 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.37□□□□□ -1.39
MTHFRP42898 AC008410.1-201ENST00000483777 339 ntBASIC6.37□□□□□ -1.39
MTHFRP42898 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.37□□□□□ -1.39
MTHFRP42898 AC091917.2-201ENST00000505002 744 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms