Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
USP8P40818 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.48□□□□□ -1.37
USP8P40818 AC016027.4-201ENST00000450866 277 ntBASIC6.48□□□□□ -1.37
USP8P40818 RNU6-775P-201ENST00000459318 96 ntBASIC6.48□□□□□ -1.37
USP8P40818 RN7SL254P-201ENST00000460609 284 ntBASIC6.48□□□□□ -1.37
USP8P40818 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USP8P40818 RN7SL362P-201ENST00000494228 267 ntBASIC6.48□□□□□ -1.37
USP8P40818 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USP8P40818 ASNSP4-201ENST00000511103 447 ntBASIC6.48□□□□□ -1.37
USP8P40818 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.48□□□□□ -1.37
USP8P40818 AC022784.5-201ENST00000522241 437 ntBASIC6.48□□□□□ -1.37
USP8P40818 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.48□□□□□ -1.37
USP8P40818 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
USP8P40818 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.48□□□□□ -1.37
USP8P40818 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USP8P40818 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USP8P40818 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.48□□□□□ -1.37
USP8P40818 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.48□□□□□ -1.37
USP8P40818 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USP8P40818 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.48□□□□□ -1.37
USP8P40818 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USP8P40818 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.48□□□□□ -1.37
USP8P40818 SMIM12P1-201ENST00000603004 274 ntBASIC6.48□□□□□ -1.37
USP8P40818 AL034374.2-201ENST00000605281 548 ntBASIC6.48□□□□□ -1.37
USP8P40818 AL353729.2-201ENST00000605859 1249 ntBASIC6.48□□□□□ -1.37
USP8P40818 AL645933.2-201ENST00000606743 1207 ntBASIC6.48□□□□□ -1.37
USP8P40818 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.48□□□□□ -1.37
USP8P40818 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.48□□□□□ -1.37
USP8P40818 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.48□□□□□ -1.37
USP8P40818 AL357140.4-201ENST00000636827 412 ntBASIC6.48□□□□□ -1.37
USP8P40818 AC099654.15-201ENST00000639802 509 ntBASIC6.48□□□□□ -1.37
USP8P40818 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
USP8P40818 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.48□□□□□ -1.37
USP8P40818 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USP8P40818 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USP8P40818 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
USP8P40818 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.48□□□□□ -1.37
USP8P40818 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.48□□□□□ -1.37
USP8P40818 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP8P40818 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP8P40818 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USP8P40818 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP8P40818 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.47□□□□□ -1.37
USP8P40818 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USP8P40818 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP8P40818 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP8P40818 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
USP8P40818 GCNT1P4-201ENST00000404096 329 ntBASIC6.47□□□□□ -1.37
USP8P40818 RNA5SP198-201ENST00000410376 127 ntBASIC6.47□□□□□ -1.37
USP8P40818 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.47□□□□□ -1.37
USP8P40818 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.47□□□□□ -1.37
USP8P40818 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.47□□□□□ -1.37
USP8P40818 AC130360.1-201ENST00000425489 1117 ntBASIC6.47□□□□□ -1.37
USP8P40818 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
USP8P40818 AC023141.3-201ENST00000436698 278 ntBASIC6.47□□□□□ -1.37
USP8P40818 CUBNP2-201ENST00000443534 1139 ntBASIC6.47□□□□□ -1.37
USP8P40818 MTND4LP12-201ENST00000448237 295 ntBASIC6.47□□□□□ -1.37
USP8P40818 HMGB1P7-201ENST00000450921 612 ntBASIC6.47□□□□□ -1.37
USP8P40818 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.47□□□□□ -1.37
USP8P40818 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.47□□□□□ -1.37
USP8P40818 AC083795.1-201ENST00000491760 320 ntBASIC6.47□□□□□ -1.37
USP8P40818 RN7SL568P-201ENST00000493069 298 ntBASIC6.47□□□□□ -1.37
USP8P40818 RN7SKP288-201ENST00000516227 268 ntBASIC6.47□□□□□ -1.37
USP8P40818 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USP8P40818 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.47□□□□□ -1.37
USP8P40818 AC130365.2-201ENST00000525882 1201 ntBASIC6.47□□□□□ -1.37
USP8P40818 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.47□□□□□ -1.37
USP8P40818 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.47□□□□□ -1.37
USP8P40818 MTATP6P25-201ENST00000574491 261 ntBASIC6.47□□□□□ -1.37
USP8P40818 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.47□□□□□ -1.37
USP8P40818 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.47□□□□□ -1.37
USP8P40818 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.47□□□□□ -1.37
USP8P40818 AC006363.1-201ENST00000603806 463 ntBASIC6.47□□□□□ -1.37
USP8P40818 uc_338.31-201ENST00000615595 186 ntBASIC6.47□□□□□ -1.37
USP8P40818 AC048341.3-201ENST00000619323 491 ntBASIC6.47□□□□□ -1.37
USP8P40818 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
USP8P40818 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP8P40818 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP8P40818 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.47□□□□□ -1.37
USP8P40818 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
USP8P40818 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
USP8P40818 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
USP8P40818 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
USP8P40818 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.46□□□□□ -1.37
USP8P40818 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
USP8P40818 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.46□□□□□ -1.37
USP8P40818 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.37
USP8P40818 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
USP8P40818 AC114876.1-201ENST00000490962 1366 ntBASIC6.46□□□□□ -1.37
USP8P40818 MTCO1P28-201ENST00000574177 1528 ntBASIC6.46□□□□□ -1.37
USP8P40818 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
USP8P40818 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USP8P40818 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USP8P40818 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.46□□□□□ -1.38
USP8P40818 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.46□□□□□ -1.38
USP8P40818 AL158827.1-201ENST00000416300 391 ntBASIC6.46□□□□□ -1.38
USP8P40818 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USP8P40818 RPS27AP6-201ENST00000427962 448 ntBASIC6.46□□□□□ -1.38
USP8P40818 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.46□□□□□ -1.38
USP8P40818 FTLP8-201ENST00000446770 267 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms